Pseudomonas chlororaphis PA23: EY04_21850
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Entry
EY04_21850 CDS
T03201
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pch03032
]
EY04_21850
03036 Chromosome and associated proteins [BR:
pch03036
]
EY04_21850
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_21850
DNA replication proteins [BR:
pch03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EY04_21850
Chromosome and associated proteins [BR:
pch03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EY04_21850
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EY04_21850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AIC21456
LinkDB
All DBs
Position
complement(4863404..4863694)
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AA seq
96 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEEEV
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctactctcatccaag
gatgtggagttggctatcaagaccatgcttgagcaaatgtcccaatgcctggcaaccgga
gatcgtatcgagattcggggctttggtagcttctctctgcactatcgtgcgccgcgtgtc
gggcgtaacccgaagactggccagtccgtcagtctagacggtaagttcgttcctcacttc
aagcctggtaaagagctgcgtgatcgagttaacgaagaggaggaggtttga
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