Pseudomonas chlororaphis PA23: EY04_21890
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Entry
EY04_21890 CDS
T03201
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pch03032
]
EY04_21890
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_21890
Enzymes [BR:
pch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EY04_21890
DNA replication proteins [BR:
pch03032
]
Prokaryotic type
DNA Topoisomerases
EY04_21890
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EY04_21890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AIC21464
UniProt:
A0AAP9VR63
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Position
complement(4872468..4875137)
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AA seq
889 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTELIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQHIPGPDFPTAAIINGREGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA
VMTMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHYIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAITEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLANDETLVGLERV
QEPSEVEGDELEDEDGEVLEGAVLDAATDSDDAVEGQQADAAGEEESQD
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tatctcgactacgcgatgagcgtaatcgtcgggcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcaccggcgtgtgctgtacgcgatgagcgagctcggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcacccgcac
ggtgataccgcggtgtacgacaccatcgttcgtatggcccagccattctccctgcgctac
ctgctggtagacggccagggtaacttcggttcggtcgacggcgacaacgcggcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaactgatccccgcggtcatgccg
accaagatccccaacctgctggtcaacggctccagcggtatcgccgtgggcatggcgacc
aacattccgccgcacaacctcggcgaagtcatcgacggttgcctggcgctgatcgacaac
ccggaactgaccgtcgatgagctgatgcagcacatcccgggcccggacttcccgaccgcg
gcgatcatcaacggtcgcgaaggcatcatcgaagcctaccgtaccggtcgcgggcgcatt
tacatgcgtgcccgctcgatcatcgaggacatcgacaaggtcggtggccgccagcagatc
gtcatcaccgagctgccttaccagctgaacaaggcgcgcctgatcgagaagatcgccgag
ctggtcaaggagaagaaactcgaaggcatcaccgagctgcgcgacgagtccgacaaggac
ggtatgcgcgtggtgatcgagctgcgtcgtggcgaagtgccggaggtgatcctcaacaac
ctctacgcgcagacccagctgcagagcgtgttcggtatcaacatcgttgcgctgatcgac
ggtcgtccgcggatcctcaacctgaaggacctgctggaagccttcgtgcgtcaccgccgt
gaagtggtgacccgccgtaccgtgttcgaactgcgcaaggcccgtgagcgtggtcacatt
ctcgaaggccaggccgttgccctgtcgaacatcgacccggtcatcgccctgatcaaggct
tcgccgaccccgtcggaagccaaggaagcgctggtcagcacgccttgggaatccagcgcg
gtgatgaccatggtcgagcgtgccggcgcggattcctgtcgtccggagaacctcgatccg
caatacggtctgcgcgacggcaagtacttcctgtcgccagaacaggcacaggccatcctg
gaactgcgtctgcaccgcctgaccggcctcgagcatgaaaaactgctggccgagtaccag
gagatcctcaatcagatcggcgagctgatccgcatcctcaacagcgccacgcgcctgatg
gaagtgatccgcgaagagctggaagtgattcgcgccgaatacggcgatgtgcgtcgcacc
gagatcctcgatgcccgtctcgacctgaccctgggcgacatgattccggaagaagaacgc
gtcgtgaccatttcccacggcggttatgccaagacccagccgctggctgcgtaccaggcc
cagcgtcgtggcggtaaaggcaagtcggcaaccggcgtcaaggatgaggactacatcgct
cacctgctggtggccaacagtcacaccacgctgttgctgttctccagcaagggcaaggtc
tactggctgaaaacctacgaaattcccgaggcttcccgtgccgcccgcggccgtccgctg
gtcaacctgctgccgctggacgatggtgagtacatcaccaccatgctgccggtcgaggaa
tacaccgaaggtcactacatcttcatggcgaccgccaacggcaccgtgaagaagaccccg
ctggaatccttcagccgtcagcgcagcgtcggtctgatcgcgctggaactggacgagggc
gatgtgctgatttccgccgcgatcaccgatggcgagcgcgaagtcatgctgttctccgat
ggcggcaaggtgactcgcttcaaggagtccgacgttcgtgccatgggccgtaccgcccgc
ggtgtgcgcggcatgcgtctgccggaagggcagaagctgatctccatgctgatcccggaa
gaaggcagccagatcctcaccgcttcggcgcgtggttatggcaagcgtacggcgatcacc
gagttccctgagtacaagcgtggcggtcaaggcgttatcgccatggtcagcaacgagcgt
aacggccgtctggtcggcgcggtccaggtgctcgacggcgaggaaatcatgctgatttcc
gaccagggcaccctggtgcgcacccgggtcgacgaagtgtccagcctgggtcgtaacacc
cagggcgtgaccttgatcaagctggctaacgacgaaacgttggtaggccttgagcgggtt
caggagccgtccgaagtcgaaggcgacgaattggaagacgaagatggcgaggtgctcgag
ggcgccgtgctggatgcggcgaccgactcggatgatgccgtcgaaggccagcaggctgac
gccgcaggcgaagaagagtcgcaagactaa
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