Pseudomonas chlororaphis PA23: EY04_23310
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Entry
EY04_23310 CDS
T03201
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00061
Fatty acid biosynthesis
pch00071
Fatty acid degradation
pch01100
Metabolic pathways
pch01212
Fatty acid metabolism
pch02024
Quorum sensing
pch04146
Peroxisome
Module
pch_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EY04_23310
00071 Fatty acid degradation
EY04_23310
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EY04_23310
09145 Cellular community - prokaryotes
02024 Quorum sensing
EY04_23310
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pch01004
]
EY04_23310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pch04147
]
EY04_23310
Enzymes [BR:
pch01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EY04_23310
Lipid biosynthesis proteins [BR:
pch01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EY04_23310
Exosome [BR:
pch04147
]
Exosomal proteins
Exosomal proteins of breast milk
EY04_23310
Exosomal proteins of breast cancer cells
EY04_23310
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AIC21734
UniProt:
A0AAP9VWF6
LinkDB
All DBs
Position
complement(5150205..5151893)
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AA seq
562 aa
AA seq
DB search
MIQDFWKDKYPAGIAADINPDEYPNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEAVVPKTSVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAVKFNDVLSQGHGQPVKDANPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMASNLNEGCEILITPLPLYHIYAFTFHCMAMMLSGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAAAERWKEVTGCPICEGYGM
TETSPVATVNPGQNIQIGTIGIPVPSTLCRIVDDAGNELPLGEVGELCVKGPQVMKGYWQ
RQDATDEVMSDGWLKTGDIALIQPDGYIRIVDRKKDMILVSGFNVYPNELEDVLTALPGV
LQCAAIGVPDEKSGESIKIFIVAKPGVTLTKEQVMEHMRANVTGYKVPKAVEFRDALPTT
NVGKILRRELRDEELKKLGVKK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagacttttggaaggataagtacccagctgggattgctgccgatatcaatcca
gacgagtatccgaatattcaggcggtgttgaagcagtcctgccaacgttttgccgacaaa
ccggcctttagcaacctcggcaagacactcacctacggtgagctgtacgaactgtccggt
gcttttgccgcgtacctgcaacagcataccgatttgcaacccggcgatcgaatcgccgtg
caactgcccaacgtcctgcaatacccggtcgcagtattcggcgccatccgcgccggcctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgac
tccggcgccaaggccctggtgtgcctggccaacatggcgcacctggccgaagccgtggtg
cccaagaccagcgtcaagcatgtgatcgtcaccgaagtggcggacctgctgccaccgctc
aagcgcttgctgatcaacagcgtcatcaagtacgtgaagaagatggtgccggcctatcac
ctgcccaaggccgtcaagttcaacgacgtgctgagccagggccatggccagccggtcaag
gacgccaacccggccagcagcgatgtcgccgtgctgcaatacaccggcggcaccaccggc
gtggccaagggcgcgatgctgacccaccgcaacctggtggcgaacatgctgcaatgccgg
gcgctgatggcctccaacctcaatgagggttgcgagatcctgatcaccccgctgccgctg
taccacatctatgccttcacctttcattgcatggcgatgatgctgagcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggcttcgtcggcctcaacaccctgttcgtcgccctgtgcaacaacgaagccttc
cgcaagctggatttctcggcgctgaaagtcaccctgtccggcggcatggcgctgcaactg
gcggcggccgagcggtggaaggaggtgaccggttgcccgatctgcgaaggttacggcatg
accgagacaagtccggtggccaccgtcaacccgggccagaatatccagatcggcaccatc
ggcatcccggtgccgtcgaccctgtgccggatcgtcgacgatgccggcaacgagctgccc
ctgggcgaagtcggcgagctgtgcgtcaagggcccgcaggtgatgaagggctactggcag
cgccaggacgctaccgatgaagtgatgagcgacggctggctgaagaccggcgatatcgcg
ttgatccagcccgatggctatatccgcattgtcgatcgcaagaaagacatgatcctggtc
tccggcttcaacgtgtatccgaacgaactggaagacgtgctgacggccctgccgggcgtg
ttgcagtgcgcggcgatcggcgtgccggacgagaagtcgggcgagtcgatcaagatcttc
atcgtcgccaagccgggcgtgaccctgaccaaggaacaggtgatggagcacatgcgcgcc
aacgtcaccggctacaaggtgcccaaggccgtcgagttccgcgatgcgctgccgaccacc
aacgtcggcaagatcctgcgtcgcgaactgcgcgacgaagagctgaagaagctgggcgtg
aagaagtaa
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