Pseudomonas chlororaphis PA23: EY04_23315
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Entry
EY04_23315 CDS
T03201
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00061
Fatty acid biosynthesis
pch00071
Fatty acid degradation
pch01100
Metabolic pathways
pch01212
Fatty acid metabolism
pch02024
Quorum sensing
pch04146
Peroxisome
Module
pch_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EY04_23315
00071 Fatty acid degradation
EY04_23315
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EY04_23315
09145 Cellular community - prokaryotes
02024 Quorum sensing
EY04_23315
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pch01004
]
EY04_23315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pch04147
]
EY04_23315
Enzymes [BR:
pch01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EY04_23315
Lipid biosynthesis proteins [BR:
pch01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EY04_23315
Exosome [BR:
pch04147
]
Exosomal proteins
Exosomal proteins of breast milk
EY04_23315
Exosomal proteins of breast cancer cells
EY04_23315
BRITE hierarchy
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
AIC21735
LinkDB
All DBs
Position
complement(5152284..5153972)
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AA seq
562 aa
AA seq
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MQPDFWNDKRPAGVPVDIDLGAYKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERYSA
AFAGYLQSSTDLVPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTNPLYTTREMRHQFKD
SGARALVYMNLFGQKVEEVLPETDIQFLIEAKMGDLMPSAKGWLVNTLVDKVKKMVPAYR
LPQAVSFKSALRLGRGQPIKPLNARLDDVAVLQYTGGTTGLAKGAMLTHGNLVANMQQAR
ACLGQLGPDGHPLLREGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIGGFI
KELKKWRFSALLGLNTLFMALMDHPEFKTLDFSNLKLTNSGGTALVKATAERWAQLTGCR
ITEGYGLTETSPVACTNPYGDQSRLGTVGLPVPGTTLKVIDDQGVEQLLGERGELCIKGP
QIMKGYWQKPEATEEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARESGVSLEELKAYCKENFTGYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgatttctggaatgacaaacgcccggccggagtgcccgtcgatatcgacctg
ggtgcctataagtcggtgatcgaggtgttcgagcgttcctgcaagaaattcgccgaccgc
ccggccttcagcaacatgggcgtgaccctgacctacgccgagctggagcgctacagcgcg
gcctttgccggttatctgcagagcagcaccgacctggtgccgggcgatcgcatcgcggtg
cagatgcccaacgtcctgcattacccgatcgccgtgttcggcgccctgcgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccacccgggaaatgcgccaccagttcaaggat
tccggggcgcgggccctggtgtacatgaacctgttcgggcagaaggtcgaggaggttctg
cccgagaccgacatccagttcctgatcgaggcgaagatgggcgacctgatgccgtccgcc
aagggctggctggtcaataccctggtcgacaaggtcaagaagatggtgccggcctatcgc
ttgccccaggccgtgtccttcaagagcgcgctgcgcctgggccgtggccagccgatcaag
cctttgaacgcccgcctggacgacgtcgccgtgctgcaatacaccggcggcaccacgggg
ctggccaagggcgcgatgctgacccacggcaacctggtggccaacatgcagcaggcccgt
gcctgcctcgggcaactggggccggacggtcatccgctgctgcgcgagggccaggaggtg
atgatcgcgccgctgccgctgtaccacatctatgccttcaccgcgaactgcatgtgcatg
atggtcaccggcaaccacaacgtgctgatcaccaacccgcgggacatcggcggtttcatc
aaggagctgaaaaagtggcgcttctcggcgctgctggggctgaacacgctgttcatggcg
ctgatggatcatcccgagttcaagaccctcgacttctccaatctcaagctcaccaactcc
gggggcacggcgctggtcaaggccaccgccgagcgctgggcacagttgaccggctgccgc
atcaccgaaggctacggcctgaccgaaacctcgcccgtggcctgcaccaacccttacggc
gaccagtcgcgcctgggcacggtgggactgccggtgccgggcacgaccctcaaggtcatc
gatgaccagggcgtcgagcagctgctgggtgagcgcggcgagctgtgcatcaaggggccg
cagatcatgaagggctactggcagaagccggaagccaccgaggaggtgctggatgccgag
ggctggttcaagtccggcgatatcgcagtgatcgatccggatggcttcgtgcgcatcgtc
gatcgcaagaaggacatgatcatcgtctcgggtttcaacgtgtaccccaacgaaatcgag
gacgtggtgatggcccatccgaaagtcgccaactgtgcggtgatcggtgtgccggacgag
cgttcgggggaggcggtgaagctgttcgtggtggcccgcgagtcgggggtcagcctcgaa
gagctgaaggcctactgcaaggaaaacttcactggctacaaggtgccgaagcacatcgtg
ttgcgtgagtcgttgccgatgacgccggtaggcaagatcctgcgtcgggagctgcgcgac
atcgcctga
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