Pseudomonas chlororaphis PA23: EY04_24315
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Entry
EY04_24315 CDS
T03201
Name
(GenBank) porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch01501
beta-Lactam resistance
pch02020
Two-component system
Module
pch_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EY04_24315
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EY04_24315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pch02000
]
EY04_24315
01504 Antimicrobial resistance genes [BR:
pch01504
]
EY04_24315
Transporters [BR:
pch02000
]
Other transporters
Pores ion channels [TC:
1
]
EY04_24315
Antimicrobial resistance genes [BR:
pch01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
EY04_24315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AIC21920
LinkDB
All DBs
Position
5365358..5366704
Genome browser
AA seq
448 aa
AA seq
DB search
MRVMKWSMIALAVAAAGTQVAMAEPFVGNQADAKGFVEDSKLDLLLRNYYYNRNKTGYHN
RDDKDWTQGFHGVFKSGYTQGTVGVGVDAFGYLGIKLDGEDRYSGSGNLSTDSEGHNHDS
FGKAGAAAKFRISKTELKIGDMQPSTSPVFAVGGSRLLPQTASGIQLQSSELEGLDLEAG
HFYSASSQDEMNRDGELHANYASSDALAVTSNSMDYIGGKYAITPELSASLYGGKLEDVW
NQYYANLNYTIPLGGDQSINLDGNIYRTTDTGKAKAGDISNTTYSLAAAYSFLKAHTLTL
GFQKVNGDTPFDYIGVGDNNRGGDSIFLANSIQYSDFNGPGEKSVQARYDLKMAEYGVPG
LSFMARYVKGWDIDGTKMDIDSPYRNYGYGEDGKHHETNLEAKYVIQTGPAKDLSFRARQ
AWHTANADQAEGDISEFRLIVDYPLSIL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgattgcactggcagtagctgcagccggtacgcaagtg
gctatggccgaaccttttgttggcaaccaggccgacgctaaaggtttcgttgaagacagc
aagctcgacctgctgcttcgcaactactactacaaccgtaacaagaccggctaccacaac
cgtgacgacaaagactggacccaaggctttcatggtgtcttcaagtccggttacacccaa
ggtactgtcggtgttggtgttgatgccttcggctacttgggcatcaaactggacggtgaa
gaccgttattccggttcgggcaacctgagcaccgacagtgaaggtcataaccacgacagc
ttcggtaaagccggtgcggcagcgaagttccgcatctccaagaccgagctgaaaatcggc
gacatgcagccttccaccagcccagtgttcgccgtaggcggttctcgtctgctgcctcaa
actgcgagcggtatccaactgcagagcagcgaactcgaaggtctcgatctcgaggctggt
catttctactcggcttccagccaggacgaaatgaaccgcgacggtgagttgcatgctaat
tacgccagttctgacgcacttgctgtcacctccaacagcatggactatatcggcggcaag
tatgcgatcactcctgaactgagtgcttcgctctatggcggcaaactggaagacgtctgg
aaccagtactacgccaacctgaactacaccattccactgggcggcgaccagtcgatcaac
ctggacggtaacatctaccgcaccaccgatactggcaaagccaaagctggtgatatcagc
aacaccacctactcgctggcagcggcctactcgttcctgaaggcgcacacccttaccctg
ggcttccagaaggtcaacggtgacactccattcgactatatcggtgtgggtgacaacaac
cgcggcggcgactcgatcttcctcgccaactccatccagtactccgacttcaacggtcca
ggcgagaaatcggtacaggctcgttatgacctgaagatggctgaatacggcgttccaggc
ctgagcttcatggcccgctacgtaaaaggctgggacatcgacggcaccaagatggacatt
gacagcccataccgcaactacggttacggtgaagatggcaaacaccacgaaaccaacctg
gaagccaagtacgtcatccagactggcccagccaaagacctgtcgttccgcgctcgtcaa
gcctggcacactgctaacgcagatcaggccgaaggcgatatctccgagttccgcctgatc
gtcgactacccactgtcgatcttgtaa
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