Pseudomonas chlororaphis PA23: EY04_24370
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Entry
EY04_24370 CDS
T03201
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_24370
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
EY04_24370
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_16
ResIII
TrwB_AAD_bind
T2SSE
AAA_10
AAA_30
AAA_7
AAA_19
CbiA
AAA_6
SRP54
P-loop_TraG
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIC21931
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All DBs
Position
complement(5378696..5380183)
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AA seq
495 aa
AA seq
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MPDSSQLVIGADLAGQPIAQAMRLANRHGLVAGATGTGKTVTLQRLAETFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKVAERIAGMPWLNHKPQAYPVTLWDIHGQSGHPLRTTLSEMGP
LLLGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDNPQLLGDDAALMTT
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPASDGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDAEKPLLALFFDEAHLLFAGTPKALQERLEQVVRLIRSKGVG
VYFVTQSPGDLPDDVLAQLGLRVQHGLRAFTAKEQKSLRAVADGFRPNPAFDALSVLTEL
GIGEALVGTLQEKGTPEMVQRVLVAPPQSRIGPLTEAERAALISSSPLVGRYDKPVDRES
AYEVLMGRKGLAPEAEVAPGKPAAEEPSFTDRAGEFLGTAAGQALKSAMRQAANQLGRQL
VRGLMGSLLGGSKRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgccggattcatcgcaactcgttatcggtgccgatctcgcggggcaaccgattgcccag
gccatgcgcctggcaaatcgtcacgggctggtggcaggcgctaccgggacagggaaaacc
gtcaccttgcaacggctggcagaaaccttcagcgatgccggtgtcgcggtgttcgccgcg
gacatcaagggtgacctgtgtggcctgggcgccgcgggcaatccccagggcaaggttgcc
gaacgtattgccgggatgccgtggctgaaccacaagccccaggcttatccggtcacgttg
tgggacattcacgggcagtccgggcacccgctgcggaccaccctgagcgaaatgggcccg
ctgctgctgggcagcctgctggaactgaccgacagtcagcaatcggcgttgtatgcggca
ttcaaggtggctgaccgcgaaggcttgttgctgctcgacctgaaagacctcaaggcgttg
ctcaaccacctcaaggacaacccgcagctgctgggggatgacgcggcgctgatgaccacc
ggctccagccaggccttgttgcggcgcctggccaccctggagcagcagggcgccgaagcc
ctgttcggcgagccggccctgcaactggaagacatcctgcaaccggccagtgatgggcgc
gggcggattcacctgctcgacgccagccgcctggtgcacgaggcgcccaaggtctatgcg
accttcctgttgtggctgctggccgagctgttcgagcaactgccggagcgcggcgatgcg
gaaaagccgctgctggcgctgtttttcgacgaagcccacctgttgttcgccggcacgccc
aaggcgttgcaggagcggctggagcaggtggtgcggctgattcgctccaaaggcgtgggc
gtgtacttcgtcacccagtcgccaggcgacttgccggacgacgtgctggcgcaactgggg
ctgcgcgtccagcacggcttgcgggcattcaccgccaaggaacagaagtccttgcgtgcc
gtggcggacggtttccggccgaacccggcgttcgatgccctgtcggtgctcaccgagctg
gggattggcgaggcgctggtcggtaccctgcaggaaaaaggtacgccggagatggtccag
cgagtgctggtggcaccgccgcagtcgcgcatcgggccgttgaccgaggccgagcgagcg
gcgctgatcagcagttcgccgttggtcggccgttatgacaagccggtcgaccgcgagtcg
gcctatgaagtgctgatggggcgcaagggcctggcacctgaggccgaggttgcgccgggc
aaaccggccgccgaggagccgagctttaccgatcgggctggcgagtttctcggtaccgcc
gccggtcaggccctgaagtccgccatgcgccaggccgccaatcaattggggcggcagctg
gtgcgtgggctgatggggtctctgctgggtggcagcaagcgccgctga
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