Pseudomonas chlororaphis PA23: EY04_24585
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Entry
EY04_24585 CDS
T03201
Name
(GenBank) LysR family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pch03000
]
EY04_24585
03036 Chromosome and associated proteins [BR:
pch03036
]
EY04_24585
Transcription factors [BR:
pch03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EY04_24585
Chromosome and associated proteins [BR:
pch03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
EY04_24585
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_AsnC-type
Cro
MarR_2
Sigma70_r4
HTH_24
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AIC21972
UniProt:
A0AAQ1J8V2
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All DBs
Position
complement(5425737..5426630)
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AA seq
297 aa
AA seq
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MFDYKLLSALAAVIEQAGFERAAQVLGLSQSAISQRIKLLEARIGQPVLVRVTPPAPTEI
GRRLLNHVQQVRLLERDLQSQVPALDEEGLPERLRIALNADSLATWWAEAVGDFCAEQHL
LLDLIVEDQTVGLKRMRAGEVAACVCASERPVAGARSVLLGAMRYRALASPAFLARHFPQ
GVQAERLARTPALVFGPDDFLQHRYLAALGVDGGFEHHLCPSSEGFIRLTEAGLGWGLVP
ELQVRDQLARGVLVELLPDKPIDVPLYWHHWRNGGQLLGLLTEHLARSSAQWLVPLA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactataaattgctgtccgccctggccgcggtgatcgaacaggccggattcgag
cgtgccgcgcaggtgctggggttgtcgcagtcggccatttcccagcgcatcaagctgctc
gaggcgcggatcggccagccggtgctggtgcgggtcacgccgccggcgccgacggaaatc
ggccggcgcctgctcaaccatgtgcagcaggtacgcctgctcgaacgcgacctgcagagc
caggtgccggccctggacgaggaaggcttgccggagcgtctgcgcatcgccctcaacgcc
gacagcctggccacctggtgggctgaggcggtgggcgacttctgtgccgagcagcacttg
cttctggacctgatcgtcgaagaccagaccgtcggcctcaagcgcatgcgagccggggaa
gtggcggcctgtgtctgcgccagcgagcggccggtggccggtgcccgcagtgtgctgctg
ggggccatgcgctaccgtgcgctggccagcccggcgttcctggcgcggcattttccgcag
ggcgtacaagccgagcgcctggcccggacgccggccctggtgttcggcccggacgatttc
ctgcagcaccgctacctggcggcgctgggggtcgatggcgggttcgagcatcacctgtgt
ccctcgtccgagggcttcatccgcctgaccgaagccggcctgggctgggggctggtgccc
gaactgcaggtgcgcgaccagttggcgcggggtgtgttggtggagcttttgccagataag
ccgatcgatgtgccgctgtactggcatcattggcgcaatggtggccaactgctgggcctg
ctcaccgagcacctggcgcgttcttcggcgcaatggctggtgccgttggcgtga
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