Pseudomonas chlororaphis PA23: EY04_25500
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Entry
EY04_25500 CDS
T03201
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00260
Glycine, serine and threonine metabolism
pch00460
Cyanoamino acid metabolism
pch00630
Glyoxylate and dicarboxylate metabolism
pch00670
One carbon pool by folate
pch00680
Methane metabolism
pch01100
Metabolic pathways
pch01110
Biosynthesis of secondary metabolites
pch01120
Microbial metabolism in diverse environments
pch01200
Carbon metabolism
pch01230
Biosynthesis of amino acids
pch01240
Biosynthesis of cofactors
pch04981
Folate transport and metabolism
Module
pch_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EY04_25500 (glyA)
09102 Energy metabolism
00680 Methane metabolism
EY04_25500 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EY04_25500 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EY04_25500 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EY04_25500 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EY04_25500 (glyA)
Enzymes [BR:
pch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EY04_25500 (glyA)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-ProteinID:
AIC22151
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Position
complement(5620838..5622193)
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AA seq
451 aa
AA seq
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MAAYTEPLRDQADLLRRGLADLRAEDAELAGILDAEVTRQHRTLSLVSSSCAANPRILAA
SASALVNVTAEGTPGKRHQVGCENVDLVESLAIRRARELFGAQYASVQSHSASNANYQVL
AALLEPGDTILGMALDHGGHLTHGSPVAFTGAHYKAIRYGTTSQGVIDYAEVRQLALAHR
PRIIICGATAYSRVVDFQRFRAIADEAGAILLADISYIAGLVATGRHPSPIDVAHVTTAC
THKQLAGPRGGLILSGRDADTKVPGLRASFSRVLEQAVFPRMQGAPAVNMIAAKAAALGY
AMSPEFDAYMGRIRSTADAMASAFMAQGYEVVGGGTENHTVLLRLRGGISGSIAASALER
CGIIVGKNRALGETRSSFVANGLCIGTGSIAQRYIDSQGCREVVDLVCRILDKVTPLSEQ
KYSLEPELQEQFRLQTEALCAMYPIADYRGN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttatacagaaccactgagggaccaggccgacctgttgcgacgtggtttggcg
gatttgcgcgctgaagacgccgaactggccgggatcctggacgctgaagtcacgcgtcaa
caccgcacactgtccctggtttcatcctcctgcgcggccaaccctcgcatcctggcggcg
tctgcctcggcactggtcaacgtcacagccgagggcacgccaggcaagcgtcatcaggtt
ggctgcgagaacgtcgacctggtcgagtcgctggcgattcgccgggcgcgggagttgttc
ggggcgcaatatgccagcgtccagtcacactccgcctcgaacgccaactaccaagtgctg
gctgccctgctcgagccgggggacaccattctcggaatggccctcgatcatggcgggcac
ctgacccacggcagccctgtcgcattcaccggcgcccactacaaggcaatccgctacggc
actacctcgcagggcgtgatcgattacgcagaggtacgccaactggcgctcgcccatcgt
ccgcgcatcatcatctgcggtgcgaccgcctattcccgggtcgtggacttccaacgcttt
cgcgctattgccgacgaggccggggccatcctcctggcggatatctcctatatcgccggg
ctggtcgccacggggcggcatccgagcccgatcgacgtggcgcatgtcaccaccgcttgt
acccacaagcaactcgcggggcctcgtggcggcctcatcctttccggccgggacgccgac
accaaggttcccggcctgagggcgagcttcagtcgggtccttgaacaagcggtattcccc
aggatgcaaggcgcgccggcggtcaacatgatcgcggccaaggccgctgcgctgggctac
gcgatgtcccccgagttcgatgcctacatgggacggattcgcagcacggccgatgcaatg
gccagcgcattcatggcgcagggctacgaggtcgtgggcggggggacggagaaccacacg
gttctgctcaggttgcgtgggggcatcagcggttcgattgccgcctcggcactggagcga
tgcggcattatcgtgggtaaaaaccgcgcactgggggaaacccggtcctcattcgtcgcc
aatggcttgtgtatcggcaccggttccatcgcccaacgctacatcgattcccaagggtgt
cgtgaagtggtcgatctggtgtgccggatactggacaaggtcacgccactcagcgagcag
aagtacagcctggagcctgagttgcaagagcagttccgactccagaccgaggcgttgtgc
gcgatgtatcccatcgccgattaccggggcaactga
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