Pseudomonas chlororaphis PA23: EY04_25560
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Entry
EY04_25560 CDS
T03201
Name
(GenBank) transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pch03000
]
EY04_25560
Transcription factors [BR:
pch03000
]
Prokaryotic type
Helix-turn-helix
Other families
EY04_25560
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
Mg_chelatase
AAA_5
HTH_8
AAA
AAA_2
GAF_3
HTH_50
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIC22163
LinkDB
All DBs
Position
5633380..5634930
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AA seq
516 aa
AA seq
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MTAKSLLTALLPLVSDLSRELPEGERYRRLLEAMRALLPCDAAALLRLDGEWLVPLAVDG
LSTDTLGRRFKVSEHPRFAALLSRPGPTRFASDSDLPDPYDGLVDGLHEHLEVHDCMGCP
LFIDERPWGLLTLDALDPQRFEPIELDALQAFASLAAATVNAAERIERLALRAEDEHQRA
EVYRQASGQNREMIGQSKAHKRLLEEIGLVGGSDLTVLITGETGVGKELVAQAIHAASPR
ADKPLISLNCAALPDTLVESELFGHVRGAFTGATNDRRGKFELANGGTLFLDEVGELSLT
VQAKLLRVLQSGQLQRLGSDQEHQVDVRLIAATNRDLAEEVRSGRYRADFYHRLSVYPLL
VPALRDRGRDVLLLSGYFLEQNRSRMGLGSLRLTSDAQAALLAYAWPGNVRELEHLIGRS
ALKALGSCRERPKILSLSAADLDLPDASAPIAPQPAPAAMAEIPGSGDLRQATENYQRQL
ISACLERHQHNWASAARELGLDRANLGRMAKRLGLK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaaatccctgctcaccgccttgttgcccctggtctccgacctgtcccgcgaa
ctgcccgaaggcgagcgctaccgccgcctgctggaagccatgcgcgccctgctgccctgc
gacgccgccgcgctgctgcgcctggatggcgaatggctggtgccgctggcggtggatggc
ctgagcaccgacaccctgggccggcgtttcaaggtcagcgaacacccgcgtttcgccgcc
ctgctcagtcgccccggccctacccgcttcgccagcgacagcgacttgccggacccttac
gacggcctggtggatggcctgcacgaacacctggaagtccacgactgcatgggctgcccg
ctgtttatcgacgaacgcccctggggcctgctgaccctggatgccctcgacccgcagcgc
ttcgaacccatcgaactggatgccctgcaggccttcgccagcctggcggcggctaccgtc
aacgccgccgagcgcatcgagcgcctggccctgcgcgccgaagacgaacaccagcgcgcc
gaggtctatcgccaggccagcggccagaaccgcgaaatgatcggccagagcaaggcgcac
aaacgcctgctggaggaaatcggcctggtcggcggcagcgacctgacggtgctgatcacc
ggcgaaaccggggtcggcaaggaactggtggcccaggccatccacgccgcctcgccccgg
gccgacaagccgctgatcagcctcaactgcgccgccctgcccgacaccctggtggaaagc
gaactgttcggccatgtacgcggcgccttcaccggcgccaccaacgaccgccgcggcaaa
ttcgagctggccaatggcggcacgctgtttctcgacgaagtcggcgagttgtcgctgacc
gtccaggccaagctgctgcgcgtgctgcaaagcggccagctgcaacgcctggggtcggac
caggagcatcaggtcgacgtgcggctgatcgccgccaccaaccgcgacctcgccgaagaa
gtgcgcagtggccgctatcgcgcggacttctatcaccgcctcagcgtctacccgctgctg
gtgccggccctgcgcgaccgcggccgcgatgtgttgctgctcagcggctacttcctcgag
cagaatcgctcgcgcatgggcctgggcagcctgcgcctgaccagcgatgcccaggcggcg
ctgctggcctacgcctggccgggcaacgtgcgcgagctggaacacctgatcggccgcagc
gccctcaaggccctgggtagctgccgcgaacggccgaagatcctcagcctgagcgccgcc
gacctggacctgccggacgcctcggcaccgatcgcgccccagcccgccccggcagccatg
gccgagattcccggcagtggcgatctgcgccaggccaccgaaaactaccagcgccagctg
atcagcgcctgccttgagcgtcaccagcacaactgggccagcgccgcccgcgagctgggc
ctggaccgcgccaacctggggcgcatggccaagcgcctgggactgaaataa
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