Pseudomonas chlororaphis PA23: EY04_27305
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Entry
EY04_27305 CDS
T03201
Name
(GenBank) transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pch03000
]
EY04_27305
Transcription factors [BR:
pch03000
]
Prokaryotic type
Helix-turn-helix
GntR family
EY04_27305
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
Asp_aminotransf
HTH_24
FAN1_TPR
pPIWI_RE_X
Motif
Other DBs
NCBI-ProteinID:
AIC22493
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Position
5990726..5992213
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AA seq
495 aa
AA seq
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MKTRKTAYPIWNRLQLAKDGHLSLREQLLLFLRKGIADGSVKAGIRLPASRVLAAQLGLS
RMTVTEAYGQLIAEGFLEARTGSGTFVMARIAEPTASPPARAEAAIGSTRARALMGNDSM
SMAPAAWPLTPGLPALDAFPYALWGRLEGRFWRRRPLPDLSYGDPQGFLPLREALAAYLG
AARGVVCQARHIVITPGAQAAVSIATLALTDQGDRVWVENPGYDAAYRSVLLAGVQAVGV
PVDKEGLDVQAGRRLAPDARLALVSPSHQYPLGVGMSLARRLALLQWAHDANAFILEDDY
DSEFRYGGAPTPALKALDGNQGRVIYVGTLSKLLAPGLRLGFLVAPEAVVDLLRDVRNGS
GHRVPLSLQATAAEFIGNGHLGSHIRRSQAVYAQRRAALLAAIHDAGSERMTVASSATGL
HLLAELPDGLDDQAIAAAAHARKIGVAPLSGFFVDAQGRPRPGLLMGFGNTRAESMQDAV
ATLCRLIDRQRGSTL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacccgtaaaaccgcctatcccatctggaaccgtctgcaactggccaaggacggc
cacttgtccttgcgcgagcaattgctgctgttcctgcgcaaaggcatcgccgatggcagc
gtcaaggccggcatccgcctgccagcctcacgtgtgttggcggcccagctggggctgtcc
cgcatgaccgtgaccgaggcctatgggcagttgatcgccgaggggttcctggaggcccgg
acaggttcgggcacctttgtcatggcccgcatcgccgaaccaacggcctcgccgcccgcc
cgggcagaggccgccatcggctccacccgggcccgggcgttgatggggaacgactcgatg
tccatggcccctgccgcctggccgctgactccgggcctgccggcgctggacgcctttccc
tatgccctgtgggggcgcctggaaggtcggttctggcgacgccggccacttcccgacctg
tcctacggcgacccacagggtttcctgccattacgcgaagccctggcggcttacctgggc
gcggcacgcggggtggtctgccaggcccgtcacatcgtgattacccccggcgcccaagcg
gcggtgtcgattgcgacactggcgctcaccgaccagggggatcgcgtctgggtcgagaat
cccggctacgatgcggcctaccgcagcgtgttgctggctggcgtgcaggcggtgggcgtt
cccgtggataaagaagggctggatgtgcaggccggccgccggctcgcgccagacgccagg
ctcgcgctggtatcgccttcgcaccagtatcccctgggggtcggcatgagcctggcgcga
cgcctggccttactgcaatgggcccacgacgccaatgccttcatcctcgaagacgattac
gacagcgagtttcgctacggcggcgcgccaacaccggcgctcaaggccctggacggcaat
caggggcgggtgatctatgtggggaccttgagcaagttgctggcgccaggcctgcgcctg
gggttcctggtcgcccccgaggcggtggtggacctgttgcgcgacgtgcgcaatggcagc
ggccaccgcgtgcctttgtcgctccaggcgacggcggcggagttcatcggcaatggccac
ctcggtagccatatccggcgtagccaggcggtttatgcacaacgtcgcgcagccttgctg
gcggccattcacgacgccggcagcgagcgtatgacggtagccagcagcgctaccgggttg
catctgctcgccgagctgcccgatgggctcgacgaccaggctatcgctgccgccgcccat
gcccgaaaaatcggcgtcgcgccgctgtcaggttttttcgttgacgcccagggtcggcca
cgtcctggcttgttgatgggctttggcaatacccgggcggagtcgatgcaggatgcggtt
gcaaccctgtgccgtctgatcgaccggcaacggggttcaaccctctag
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