Pseudomonas chlororaphis PA23: EY04_27360
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Entry
EY04_27360 CDS
T03201
Name
(GenBank) LysR family transcriptional regulator
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pch03000
]
EY04_27360
Transcription factors [BR:
pch03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EY04_27360
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
OpuAC
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AIC22504
UniProt:
A0A5M7C8N5
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Position
complement(6004592..6005521)
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AA seq
309 aa
AA seq
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MNIDTRIKFRHLVCFLEMSRQGSLARAADVLAVSQPAMSKTLKELEELLDTRLFARSKAG
LSLTEAGMAFLRYAGPSVQALREGVNTLRGGEYAAGVVRLGVLSTAESLLLPEVVRRLHE
RHSALVVSVVTGPSAYLLSQLRVGDVDLVVGRMTDSPQIQGLSFEHLYSESMTLVARPDH
PLLHGPLDRHALEQYPLVLPLAGTTIRKFADSLFVQCGISQSRQRLETLSVALSRRYALS
SDALWIAPLDAVRLDLANGELREIDLGQREPGGSVGISSNASLPLSLAAQWCVEVLREVG
QAYREGRYP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgaacatcgatacccgcatcaaattccgtcacctcgtatgttttcttgaaatgtctcgc
cagggcagcctggcgcgggcggcggatgtgctcgcggtgagccagccggcgatgtcgaaa
accctcaaggaactggaggaactgctcgacacccggctgttcgcccggagcaaggccggg
ctcagcctgacggaggccggcatggcttttctgcgttacgccgggccctcggtgcaggcc
ctgcgcgagggggtcaacactttgcgcggcggtgaatatgccgccggggtggtgcgcctg
ggtgtgctctcgaccgccgaaagcctgctgctgccggaagtggtgcgacgcctgcacgaa
cggcattcggcgctggtggtgagcgtggtcaccggccccagcgcctacctgctgtcacag
ttgcgggtcggcgatgtcgacctggtggtcgggcgcatgacggacagcccgcagatccag
ggcctgagcttcgagcatctgtacagcgagtccatgaccctggtggcgcgccccgatcat
ccgttgctgcacgggccgctggatcggcatgcgctggagcagtacccgctggtgttgccg
ctggccggcaccaccatccgcaagttcgccgacagcctgttcgtgcagtgcggcatcagc
cagtcgcgccagcgcctggaaaccctctcggtggccttgagccggcgctatgcgctgtcc
agcgatgcgctgtggatcgccccgctggacgcggtacgcctagacctggccaatggcgag
ctgcgcgagatcgacctcgggcagcgcgagccgggcggctcggtgggcatctccagcaat
gccagcctgccgctgtcgctggcggcgcagtggtgcgtcgaggtgctgcgggaagtcggg
caggcctatcgcgaggggcgttatccataa
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