Pseudomonas chlororaphis PA23: EY04_27420
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Entry
EY04_27420 CDS
T03201
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch03030
DNA replication
pch03430
Mismatch repair
pch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EY04_27420
03430 Mismatch repair
EY04_27420
03440 Homologous recombination
EY04_27420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pch03032
]
EY04_27420
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_27420
Enzymes [BR:
pch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EY04_27420
DNA replication proteins [BR:
pch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EY04_27420
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EY04_27420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIC22516
LinkDB
All DBs
Position
complement(6017145..6017756)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPSSSCRATEIAVVILEQGRIVERYQSLMNAGVRVPAFIEQLTGIS
NAMLRSAPPAEQVMNEVNEFVGTTPLLAHNAAFDQKFWDYELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFASLPHTGQAHRAMADAEMAANLTAHLALELRQKHGLRELSHD
FLCKLQKVPAAKIGEHLKRHRDA
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcatcgcagtcatcgactttgaaaccaccgggatctccccgagcagcagttgc
cgggccacggaaatcgccgtggtgatccttgagcaggggcgcatcgtcgagcgttaccag
agcctgatgaatgccggcgtgcgggtgccggccttcatcgaacagctgaccggcatcagc
aacgccatgctgcgcagcgcgccgccggccgagcaggtgatgaacgaggtcaacgagttc
gtcggcaccacgccgctgctggcgcacaacgccgcgttcgaccagaagttctgggactac
gagctgggccggatcaagcgcacccgcttgcagaacttcgcctgttccctgttgctggcg
cgacggctgatgccggcggcgcccaaccacaagctcggcaccctcaccacgttcgccagc
ctgccccataccggccaggctcaccgggccatggccgacgcggaaatggccgccaacctc
accgcgcacctggcgctggagctgcggcagaaacacgggctgcgcgagctgtcccacgac
ttcctgtgcaaattgcagaaagtgccggccgccaagatcggcgaacacctcaagcgtcat
cgcgacgcctga
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