Pseudomonas chlororaphis PA23: EY04_28130
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Entry
EY04_28130 CDS
T03201
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch03030
DNA replication
pch03430
Mismatch repair
pch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EY04_28130
03430 Mismatch repair
EY04_28130
03440 Homologous recombination
EY04_28130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pch03032
]
EY04_28130
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_28130
Enzymes [BR:
pch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EY04_28130
DNA replication proteins [BR:
pch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EY04_28130
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EY04_28130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AIC22628
UniProt:
A0AAP9VXX2
LinkDB
All DBs
Position
6191974..6193011
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGTLAPVYVISGDDPLLCQEAADAIRSAARQQGFDERQVFSADANFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAAFIEYCSRPAEDTLLLISLPKLDGSA
QKTKWGKALIDGEQTQFIQIWPVDASQLPQWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLVDAILNGEAAHALRMLEGLRGE
GVEPPVILWALSRELRSLANMSLQYSQGTPLDKVFSQARPPVWDKRKPLMSKALQRYSAP
RWAQLLLDAQRIDAQIKGQAAGSPWSSLSRLSLLMAGQRLPLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcccccgctcaactcggcaaacacctgcaaggcacgctcgcaccggtctac
gtcatcagtggcgatgatccgttgctgtgccaggaagccgccgatgccattcgcagcgcc
gcccgccagcagggcttcgatgaacgccaggtattcagcgccgacgccaatttcgattgg
ggcaccctgctgcaagccggtgcgagcatgtcgctgttcgccgaaaaacgcctgctggaa
ctgcgcctgccttcgggcaagcccggcgacaaaggcgcagcggccttcatcgaatactgt
tcacggccggccgaagacaccctgctgctgatcagcctgcccaagctcgatggcagcgcg
caaaagaccaagtggggcaaggccctgatcgatggcgagcagacccagttcatccagatc
tggccggtggatgccagccagttgccgcagtggattcgccaacgcctgtcccaggccggg
ctttccgccagccaggacgccgtggaactcatcgcggccagggtagaaggcaacctgctg
gccgcggcccaggaaatcgaaaagctcaagctgatggccgagggtggccagatcacggtg
gaaaccgtgcaagcggcagtcgccgacagtgcgcgcttcgacgttttcgggctggtggac
gcgatcctcaacggtgaggccgcgcatgccctgcgcatgctcgaaggcctgcgcggcgaa
ggtgtcgagcctccggtgattctctgggcactgtcccgggaactgcggtcgctggccaat
atgtcgctgcagtacagccagggcactccgctggataaagtgttcagccaggcccgcccg
cccgtctgggacaaacgcaagccgctgatgagcaaggccctgcagcgctattccgcgcca
cgctgggcgcaattgctgctcgatgcccagcgcatcgatgcgcagatcaaggggcaggct
gctggctcgccctggagcagcctgagccgcctgtcgctgctgatggccggacaacgcttg
cctctccccgccgaataa
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