Pseudomonas chlororaphis PA23: EY04_29085
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Entry
EY04_29085 CDS
T03201
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch03030
DNA replication
pch03410
Base excision repair
pch03420
Nucleotide excision repair
pch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EY04_29085
03410 Base excision repair
EY04_29085
03420 Nucleotide excision repair
EY04_29085
03440 Homologous recombination
EY04_29085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pch03032
]
EY04_29085
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_29085
Enzymes [BR:
pch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EY04_29085
DNA replication proteins [BR:
pch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EY04_29085
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EY04_29085
NER (nucleotide excision repair)
GGR (global genome repair) factors
EY04_29085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AIC22810
LinkDB
All DBs
Position
complement(6377867..6380665)
Genome browser
AA seq
932 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAQYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLNELYAQLDIVPSLPIRGAKTLPAKLEEHREM
AFLSYQLATIKVDVPLDIGLDDLHLGEPDRDKLLELYSLLEFKSWLDELQRDAKRLELSV
AASEPVADLLTQVEIEVPVVVEAQYETILDQARFDVWLEKLKNAKLFAFDTETTGIDAQQ
AQLVGLSFAVQANEAAYIPLTHSYIDVPEQLDRDTVLRALKPILEDPNKLKVGQHAKFDM
NILANCAIGGDQANGITVRGVAFDTMLESYVLNSTATRHDMDSLAEKYLGHTTVSFQDIA
GKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQVLHEKLAAIPSLASVLSDIEMPVVPVL
ARIERQGALVDADLLRVQSIELGDKMVELEREAFEIAGEEFNLGSPKQLGVILYDKLGLP
VLKKTAKGQPSTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIH
TSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPPGYKLLAADYSQIELRIMAH
LSRDEGLLNAFRNNLDVHTATAAEVFKVELKDVSSDQRRSAKAINFGLIYGMGAQKLGKD
IGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAAEQGYVETLFGRRLYLPEINSNKPQER
AGAERTAINAPMQGTAADIIKKAMVAVDNWLATSGLDAKVILQVHDELVLEVREDLVDQV
SEEIRGYMSKAATLDVPLLVEVGVGSNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcctacctgtaccgcgccttccac
gcgctgccacctttgaccacttccaaaggcatgccgaccggtgcggtcaagggcgtgctg
aacatgctcaagagtctgcgcaagcagtacccggacagtccgttcgccgtggtgttcgac
gccaagggcgggaccttccgcgatgacatgtacgcccagtacaaggccaatcgcccgagc
atgcccgacgacatgcgggtgcagatcgagccgttgcacgccagcgtgatcgccctgggc
tttccgctgctgtgcgtcgagggcgtcgaggcggacgacgtgatcggcaccctggcccgc
agcagcgcggcggccgaccggccggtggtgatctccactggcgacaaggacatggcgcag
ctggtggatgggcacattacgctggtcaacaccatgtccggtagcagcatggacgtggag
ggcgtgaaggagaaattcggcgtcgctcccgagcagatcatcgattacctggcgctgatg
ggcgactcctccgataacattccgggtgtgccgggcatcggcccgaagaccgcttccggt
ctgttggtgggggtcaacggtggcttgaacgagctgtatgcccagctcgatatcgtcccg
agcctgccgattcgtggggccaagaccctgccggccaagctcgaagagcacagggagatg
gctttcctctcctatcagttggcgaccatcaaggtcgatgtgccgctggatatcggcctg
gacgacctgcacctgggcgaaccggaccgcgacaaactgctcgagctgtacagcctgctg
gagttcaagagctggctcgacgagctgcagcgcgatgccaagcgcctggagctgagtgtc
gccgcctctgagccggtggccgacttgttgactcaggtcgagatcgaagtgccggtggtt
gtcgaagcgcagtacgaaaccatcctcgatcaggcgcgtttcgatgtctggctggagaaa
ctgaagaacgccaagctgttcgccttcgataccgaaaccaccggtatcgacgcccagcag
gcgcagcttgtggggttgtccttcgccgtgcaggccaacgaagcggcttatattccgctg
acccactcttatatcgatgtgccggagcaactggatcgcgacaccgtcctgcgggccctg
aagccgattctcgaagacccgaacaaactcaaggtcggccagcacgccaagttcgacatg
aacatcctggccaactgcgccatcggcggcgatcaggccaacggcatcacggtgcgcggg
gtcgccttcgacaccatgctcgagtcctatgtgctcaattccacggctacccggcacgac
atggacagcctggcggagaaatacctgggccacaccaccgtgagcttccaggacatcgcc
ggcaagggcgccaagcagctgacgttcgaccagatcgccctcgagcaggccgggccttat
gcggcggaagacgccgatgtgaccctgcgtctgcatcaggtcctgcatgaaaaactggct
gcgatcccgagcctggccagcgtgctcagcgatatcgaaatgcccgtggtgccggtactg
gcgcggatcgagcgccagggagcgctggtggatgccgacctgctgcgtgtgcagagcatc
gaactcggcgacaagatggtggaactggagcgtgaagccttcgagatcgccggcgaagaa
ttcaacctcggctcgcccaagcagttgggggtgattctctatgacaagctcggcctgccg
gtgctgaagaaaaccgccaaaggccagccgtccactgctgaagaagtgctggccaagctg
gcggaggacgactacccgctgcccaaggtgctgatgcagtaccgctccatgagcaagctc
aagagcacctacaccgaccgcttgccggagcagatcaacccgcgtaccgggcggatccat
acctcctaccatcaggcggtcgcgtctaccgggcgtttgtcttccagcgatccgaacctg
cagaacatcccggtgcgtaccgccgaaggccggcgtatccgccaggcctttatcgcgccg
cctggctacaaactgctggcggctgactattcgcagatcgaactgcggatcatggcgcac
ctgtcccgcgacgaagggctgctgaatgccttccgcaataacctcgacgtgcacacggca
actgcggccgaagtattcaaggtcgagctcaaggacgtcagttccgatcagcgccgcagc
gccaaggcgatcaacttcggcctgatctacggcatgggcgcgcagaagctcggcaaggac
atcggcgtcgataccaagaccgccaaggcctatatcgacacctacttcgcccgctatccc
ggcgtgcgcgaatacatggatcgcacccgcgcccaggctgcggaacagggttatgtggaa
accctgttcgggcgccgcctgtacctgccggagatcaactccaacaagccgcaggaacgc
gccggcgccgaacgtacggcgatcaacgcgccgatgcagggcacggcggccgacatcatc
aaaaaggccatggtggcggtggataactggctggcgacctcaggcctggatgccaaagtc
atcctgcaggtgcacgacgaactggtgctggaagtgcgcgaagacctggtggaccaggta
agcgaggagattcgcggctacatgagcaaggccgcgaccctggatgtgccgctgctggtc
gaggtcggggtgggcagtaactgggatgaggcgcactga
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