Pseudomonas chlororaphis PA23: EY04_29860
Help
Entry
EY04_29860 CDS
T03201
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch03420
Nucleotide excision repair
pch03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EY04_29860 (uvrD)
03430 Mismatch repair
EY04_29860 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_29860 (uvrD)
Enzymes [BR:
pch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EY04_29860 (uvrD)
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EY04_29860 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
EY04_29860 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
PcrA_UvrD_tudor
AAA_22
RHH_1
Motif
Other DBs
NCBI-ProteinID:
AIC22964
UniProt:
A0A3G7I6E4
LinkDB
All DBs
Position
complement(6537670..6539853)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRQRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRDLGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRGIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHVLVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSEDFPDTEVIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLEGRGNDAALERVINVPTRGI
GEKTVEAIREHARHSHVSMWEAMRQLVANKGVTGRAAGALGAFMELIEHLATVTAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFEHTEEDQELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
SQSTSSLFGGSEIPDTGLSLGQAVRHSVFGDGVILNFEGAGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gctgcctccttgggtcgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcctcgccccactcgatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccagcgcatcgagcagttgatg
gggatcaacccggccggcatgtgggtcggtaccttccacggcctggcgcaccgcctgctg
cgggcgcactggcaagaggccggcctgagccagaccttccagatcctcgacagcgacgac
cagcaacgcctggtcaagcgggtgatccgcgacctcggcctggacgagcagcgctggccg
gcccggcaggcccagtggttcatcaacgggcagaaggacgaaggcctgcgtccgcaacac
attcaagccagcggcgacctgttcctggccaccatgcgcggcatctatgaagcctacgag
gccgcctgccagcgcgccggggtcatcgacttctccgaactgctgctgcgcgccctggac
ctgtggcgtgaccacccgggcctgctggcgcactaccagaagcgtttccgccatgtgctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggccaag
ggcggcgacagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgcggg
gcgaagatcgagaatatccaccagtattccgaagacttcccggacaccgaagtgatccgc
ctggagcagaactaccgctccaccgccggtatcctcaaggccgccaacgccctgatcgcc
aataacaccgggcgcctgggcaaggaactgtggaccgacggcggcgaaggcgaagcgatc
aacctgtacgccgccttcaacgaacacgatgaagcgcgctacgtggtggaaaccatcgaa
agcgccctgaagaccggcctggcccgcagcgatatcgccatcctctatcgctccaacgcc
cagtcgcgggtgctggaagaagcgctgctgcgcgagcgcattccgtatcgcatctacggc
ggccagcgcttcttcgaacgcgccgaaatcaagaacgccatggcttacatgcgcctgctc
gaaggtcgcggcaacgacgcggccctggagcgggtgatcaacgtgccgacccgcggcatt
ggcgaaaagaccgtcgaagcgattcgcgaacatgcgcgccacagccatgtgtcgatgtgg
gaagcgatgcgccagctggtggccaataaaggtgtgaccggacgcgccgccggtgccctg
ggcgccttcatggaactgatcgagcacctggcgaccgtgaccgccgagatgccgttgcac
ctgatgacccagaccgtcatcgagcagtccggtttgatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcgcgcaac
ttcgagcacaccgaagaagaccaggaactgacgccgctggcggccttcctcggccacgct
tcgctggaagccggcgacacccaggccgacgagcacgaagacagcatccagctgatgacc
ctgcacagcgccaagggcctggaattcccttacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagcccggccgccttgaagaagaacggcgcctg
gcctacgtcggtatcacccgggcgatgcagaacctggtgatgacctatgccgagacccgt
cgcctgtacggcagcgagacctacaacaaggtgtcgcgtttcgtacgggaagttccgaag
gggctgatccaggaagtgcgcctgtccaacagcgtcagccgtccgttcggcggtggccag
tcgcagagcaccagcagcctgttcggtggcagcgagatcccggacaccggcctcagcctc
ggccaggcggtacgccactcggtattcggcgacggcgtgatcctcaacttcgaaggcgcc
ggcgcccaggcccgggtccaggtgaacttcagcgaaggcagcaagtggctgatgctcggc
tacgccaagctcgaagccatctga
DBGET
integrated database retrieval system
