Pseudomonas chlororaphis PA23: EY04_29875
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Entry
EY04_29875 CDS
T03201
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pch
Pseudomonas chlororaphis PA23
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pch03000
]
EY04_29875
Transcription factors [BR:
pch03000
]
Prokaryotic type
Helix-turn-helix
Other families
EY04_29875
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Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AIC22966
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All DBs
Position
6543212..6544078
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AA seq
288 aa
AA seq
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MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC
SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREKLDPVELQR
AVTLMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAI
CISQSGRSKDLLITANLVRESGASLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSVKALDD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttgaatctgttgcagcacatcgcccaatcacgccatctcttgcgcaagtcggagctcaag
gtcgccgatcatgtgctgctcgaccctgcggctgtgatgcacagttccatggccgatctg
gcccacagcgtgggtatcagcgagccaaccatcgtgcgcttctgccgggccatcggctgc
tcgggtttccaggacctgaagctcaagctggcccagagcctggccgccggggcgagcttc
ggccagttcgcgattcatgaagacgactcggtcgccgactacagcctgaagattttcgac
accaccctgcataccctgatggaggttcgcgagaagctcgatccggtggagttgcagcgg
gcggtgaccctcatgtcccaggcccagcgcgtggagttctacggcttcggcgcttccggc
gcggtggcggcggatgcccagcacaagttcttccgtttgctgctgaccgcggcggcctat
tccgacccgcatatgcaggcaatgtcggcggtgaccctaaagcccaccgacgtggcgatc
tgcatttcccagtccgggcgttccaaggacctgctgatcaccgccaacctggtgcgtgaa
agcggcgcctcgctgatcaccctgtgcccgagccagactccattggccgagttgtcgacc
gtcaacctggcaatcgacgtgcacgaagacaccgagatctacaccccgctgacctcgcgt
atcgcccacctggtggtgatcgacgtcctggcgatgggcgtggccatggctcgcggcccg
agcctggtcaaccacctcaagagcgtcaagcgcagccttcgcagcctgcgcctgtcgccc
aagtcggtcaaagcgcttgacgattga
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