Pseudomonas chlororaphis PA23: EY04_31965
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Entry
EY04_31965 CDS
T03201
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00260
Glycine, serine and threonine metabolism
pch00460
Cyanoamino acid metabolism
pch00630
Glyoxylate and dicarboxylate metabolism
pch00670
One carbon pool by folate
pch00680
Methane metabolism
pch01100
Metabolic pathways
pch01110
Biosynthesis of secondary metabolites
pch01120
Microbial metabolism in diverse environments
pch01200
Carbon metabolism
pch01230
Biosynthesis of amino acids
pch01240
Biosynthesis of cofactors
pch04981
Folate transport and metabolism
Module
pch_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EY04_31965 (glyA)
09102 Energy metabolism
00680 Methane metabolism
EY04_31965 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EY04_31965 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EY04_31965 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EY04_31965 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EY04_31965 (glyA)
Enzymes [BR:
pch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EY04_31965 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AIC23372
UniProt:
A0AAQ1F5Z0
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All DBs
Position
6993431..6994684
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTNTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIENAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVELAGWICDILDHLGDADVEANVARQVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccaaatccagggttatgacgatgcactgctggcggccatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggagaactacaccagc
aagcgcgtgatgcaagcgcaaggcagtggcctgaccaacaagtacgccgaaggttatccg
ggcaagcgctactacggtggctgcgagcacgtggacaaggtcgaggccctggccatcgag
cgcgccaagcaactgttcggcgctgactacgccaacgtccagccgcactccggttcctcg
gccaacagcgccgtatacctggccctgctgcaagccggcgacaccatcctgggcatgagc
ctggcccatggcggccacctgacccacggcgccaaggtgtcatcctcgggcaagctgtac
aacgccgtgcagtacggcatcgacaccaacactgggctgatcgactacgacgaagtcgag
cgcctggccgtcgagcacaagccgaagatgatcgtcgccggcttctcggcctactccaag
accctcgacttcccacgtttccgtcagatcgcggacaaggtcggcgcctatctctttgtc
gacatggcccacgtcgccggtctggtcgccgctggcctgtacccgaacccgctgccttac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaaggccaacgaagaaatcgagaagaagctcaacgccgcggtattccctggcgcc
cagggcggcccgctgatgcacgtgatcgccggcaaggcggtgtgcttcaaggaagcgctg
gagcctggcttcaaggcctaccagcagcaagtgatcgagaacgcccaggccatggccggc
gtatttatcaaacgcggctacgatgtagtgtccggcggcaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctcaccggcaaggatgcggacgccgccctggggcgcgcc
cacatcaccgtgaacaagaacgctgtcccgaacgatccacagtcgccgttcgtgacctcc
ggcctgcgtatcggcaccccggcggtgaccacccgcggcttcaaggttacccagtgcgtg
gagctggccggctggatctgcgacatcctcgaccacctcggcgacgccgatgtcgaggcc
aatgtcgctcgtcaggtgtcggccctgtgcgcggacttcccggtttatcgctga
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