KEGG   Pseudomonas chlororaphis PA23: EY04_32070
Entry
EY04_32070        CDS       T03201                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pch  Pseudomonas chlororaphis PA23
Pathway
pch02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pch00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EY04_32070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pch03021]
    EY04_32070
Transcription machinery [BR:pch03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EY04_32070
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH Sigma70_ECF HTH_17 HTH_24 Sigma70_r3 MerR HTH_29 FaeA HTH_31
Other DBs
NCBI-ProteinID: AIC23393
LinkDB
Position
complement(7017530..7018048)
AA seq 172 aa
MSSAQSPHSDLVGALYRDHRGWLLAWLRRNVACPQRAEDLSQDTFVRLLGRDELKAPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPEEEQPSPEEQQSILEDLKAIDRLLGKL
SSKARAAFLYNRLDGLGHAEIAERLGVSVPRVRQYLAQGIRQCYVALYGEPL
NT seq 519 nt   +upstreamnt  +downstreamnt
gtgtcgtcagcccaaagcccccacagtgacctcgttggcgcgttgtatcgcgaccatcgc
ggctggctgctggcctggctgcgacgcaacgtggcctgcccacaacgggccgaggacctg
agccaggacaccttcgtccgcctgctgggccgcgacgaactgaaggccccgcgcgagccg
cgggcgttcctggtggccatcgccaagggcctgctgttcgactacttccgccgcgccgcg
ctggaacaggcctacctcaccgaactgatgctgatcccggaagaggaacaaccctccccg
gaagaacagcaatcgatcctcgaagacctcaaggccatcgaccgcctgctgggcaagctg
tcgagcaaggcccgcgcggccttcctctataaccgcctcgatggcctcggccatgccgaa
atcgccgaacgcctcggcgtgtccgtgccgcgggtcaggcagtacctggcccagggcatt
cgccagtgctacgtcgccctgtacggtgagccgctatga

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