Pseudomonas chlororaphis PA23: EY04_32075
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Entry
EY04_32075 CDS
T03201
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch03030
DNA replication
pch03430
Mismatch repair
pch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EY04_32075
03430 Mismatch repair
EY04_32075
03440 Homologous recombination
EY04_32075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pch03032
]
EY04_32075
03400 DNA repair and recombination proteins [BR:
pch03400
]
EY04_32075
Enzymes [BR:
pch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EY04_32075
DNA replication proteins [BR:
pch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EY04_32075
DNA repair and recombination proteins [BR:
pch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EY04_32075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIC23394
LinkDB
All DBs
Position
complement(7018303..7019010)
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AA seq
235 aa
AA seq
DB search
MSLFAWLRPASTALSAEQQQRRERLPVAPPLGECSLREQRWVVLDLETTGLNLNRDQVLS
IGAVVIEDGAIDFGQQFERTLQRTDHKLSPSVLIHGLGPSAIAAGSDPVEALLDFMEFVG
DSPLLAFHAPFDQHMLGRALKDSLGYRLQHPFLDVAEMAPLLCPQAHIREAGLDDWMGYF
KLHAGERHHAAADALATAELALILFSRARQQQIHSPLNLQQRLSQWKRRQQSHSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcgcctggttgcgcccggccagcacggcactcagcgccgaacagcaacaa
cgccgcgagcgcctgcctgttgccccgccgctgggcgaatgcagcctgcgtgaacagcgc
tgggtggtgctggacctggaaaccaccgggctcaacctcaaccgcgaccaggtgctgtcc
attggcgcggtggtgatcgaagacggcgccatcgacttcggccagcagttcgaacgcacc
ttgcagcgtaccgaccacaagctcagccccagcgtgctgattcatggcctcggcccgagt
gcgatcgccgccggcagcgacccggtggaggccttgctggatttcatggagttcgttggc
gacagtccgctgctggccttccatgcgccgttcgaccagcacatgctcggccgggccctg
aaggacagcctgggttatcgcctgcagcatccgttcctcgacgtcgccgagatggccccg
ctgctctgcccccaggcgcatatccgcgaagccgggctggatgactggatgggctacttc
aagctgcacgccggcgaacgccaccacgccgccgccgacgccctggccaccgccgaactg
gcgctgatcctgttcagccgcgcccgccagcagcagatccatagcccgctgaacctgcaa
cagcggctcagccaatggaagcgccggcaacagtcgcactccttctga
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