Ectopseudomonas chengduensis: QYM18_01980
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Entry
QYM18_01980 CDS
T09586
Name
(GenBank) SbcC/MukB-like Walker B domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pche
Ectopseudomonas chengduensis
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pche03400
]
QYM18_01980
DNA repair and recombination proteins [BR:
pche03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QYM18_01980
Archaeal homologous recombinant proteins
QYM18_01980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
cobW
AAA_15
nSTAND3
AAA_21
RsgA_GTPase
TsaE
AAA
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WKC37877
LinkDB
All DBs
Position
complement(416381..419815)
Genome browser
AA seq
1144 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFAAEPFAGSGLFAITGPTGAGKTTLLDAICLALYHRTPR
MSTLSASGNELMTRHTADCLAEVEFEVKGQGYRAFWSQRRARDKVDGALQAPKVELARIA
DGEILTDKIREKESLTAELTGLDFERFTKSMLLAQGGFAAFLEANANQRAELLEELTGTE
IYGQISQQVYERTKAAEQALNMLKSRAQGMELLDEAQRTELQAEQQRLSLEESPLLARQQ
ALQSQRRWREALQQAEQQREQARLGLEQAQLARNEAAGELQRLAASEPAARLQPLYLAWQ
QAQQDRQQAQQVLDDLHQQQRHSTEREHQQLWLASRYAQQSLSLRHAELQRLAGQRETLH
ARMSAAPQRERLGELLGSWRVQFDQRGQLLKEQQALHARMAQEGEQLAALQQQRDQLGVQ
QADALKRLEDARASEARQQSELQALLGEGDEAGLRQRWQQLQVQGRVLDRLEQLAQSREQ
TAAQIAELTPRLAQLQQQHTRKNDEITGLRERYKALKQQQADKEKLLEQEQRIQDLEAYR
AQLQPGEACPLCGSLEHPAVSQYQALNVSATCQALEQCRNELAQLESQGGILRDELTRLV
TQIAQVQQQLEQASQQAAQQDAQWQQQLTEQALQLSDGAALCELQRQHEQSLTHLQTRLA
SVEAGQAQLAQARGAREVAERALADAQQRQALLARDEENLQARQAEQGQDLQRLQQALRH
HEQVLLSSLEGFAVELPSDAGLWLDEQEQAWRDWQQAQAQDQQLQDQQREAQRLLADAET
QAGHWQQRWQDEGALTLAEPELSAQPQLALNEAANSLASAQRESDALRGREQSQQTLFLQ
LQQRSSEAEQHWLTALTASPFSDLAAFLAALLEEGERERLAALQARVERALTEASTLLAA
ADAQLQQLSATPQTELALGELDEQLQVLQSELRALSQRQGELRAQLQADETRRSSQQALF
AEISAQESEQRLWQQLNGLIGSADGAKFRKFAQGLTLDHLIHLANRQLTRLHGRYQLARK
GSGELELEVCDTWQADVARDCRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFG
TLDGETLEVALDALDNLNASGKTIGVISHVEAMKERIPVQLRVHKGVGLGYSRLDARFAV
KEGA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcgcctcaagaacctcaattccctcaagggcgagtggaagatc
gacttcgctgccgagcctttcgccggtagcggcctgttcgccatcaccgggccgaccggt
gcgggcaagaccaccttgctcgacgccatttgcctggccctgtaccaccgcacgccgcgc
atgagcacgctgtcggccagtggcaacgagctgatgacgcggcataccgccgactgcctg
gccgaggtcgagttcgaggtcaaggggcagggctaccgcgccttctggagccagcgccgc
gcgcgggacaaggtcgacggtgcgttgcaggcgcccaaggtcgagctggcacgtatcgcc
gatggtgaaatcctcaccgacaagattcgcgagaaggaaagtctcaccgccgagctgacc
ggcctggatttcgagcgcttcaccaagtccatgctgctcgctcagggtggcttcgcggct
tttctcgaagccaatgccaaccagcgcgccgagctgctggaggaactgaccggcaccgag
atttacgggcagatatcccaacaggtctacgagcgtaccaaggctgccgaacaggcactc
aatatgctgaaaagccgcgcccagggcatggagttgctcgatgaagcgcagcgcaccgag
ctgcaggccgagcagcagcgtctgagcttggaggagtcgccgctgctggcccggcagcaa
gctctgcaaagccagcgccgttggcgtgaggcgctacagcaggccgagcagcaacgggag
caggcgcgactcggactggagcaggcccagctggctcgtaacgaggcagccggtgaactg
cagcgcctggccgccagtgagccggctgctcgattgcagccgctgtatctggcctggcag
caggcgcagcaggacaggcagcaggcacagcaggtgctggatgacctgcatcagcagcaa
cgccacagcaccgagcgcgagcaccagcaactctggctggccagccgctatgcccagcaa
agcctgagcctgcgtcacgcggagctgcagcgtctggccgggcagcgtgaaacgctgcac
gcacgcatgagcgctgcgccgcaacgggaacgcctgggcgagcttctgggtagttggcgt
gtgcagttcgatcagcgcgggcaactgctcaaggagcaacaggcactgcacgcacgcatg
gcgcaggagggtgaacagctcgccgccttgcagcagcagcgtgatcagctcggtgtgcag
caggccgacgcgctgaagcggctggaggatgcgcgcgccagcgaggccagacagcagagc
gagctgcaggccctgctgggcgagggcgacgaggctggactgcgccagcgttggcagcaa
ctgcaagtgcaagggcgcgtattggatcgtctggagcagctggcgcagagccgcgagcaa
acggctgcacagatagccgagttgaccccgcgtctggctcagttgcagcaacagcacacc
cgtaagaacgatgaaatcaccggcctgcgcgagcgctacaaggcgctcaagcaacagcag
gccgacaaggaaaagctgctggagcaggagcagcgcattcaggatctggaagcctaccgc
gcccagctgcagccgggcgaagcctgcccgttgtgtggttcgctcgagcatccggcggtc
agtcagtaccaggcgctcaacgtctctgccacgtgccaggcgctggagcagtgccgcaac
gaactggcgcaactggaaagccagggcggcattctgcgtgacgagctgacccggctggtc
acgcagatcgctcaggttcagcagcaactggagcaggcgagccagcaggccgcccagcag
gacgcgcaatggcagcagcaactgaccgagcaggccttgcagctttctgacggtgccgct
ttgtgcgaattgcagcgccagcatgagcagagtctgacgcatctgcagacgcgactcgcc
tcggtcgaggccgggcaggcgcaactggcacaggcgcgtggtgcgcgtgaagtggccgag
cgggcgttggctgatgcgcagcagcgccaggcgctactggcgcgtgatgaggagaacctg
caggcgcgacaagccgagcagggccaggacctgcagcgtttgcagcaggcgcttcggcat
cacgagcaagtgctgctgagcagtcttgagggctttgctgttgagttgccatcggacgct
ggcctctggctggacgagcaggagcaggcctggcgcgactggcagcaggcccaggcgcag
gatcagcaactgcaggatcagcagcgcgaggcgcagcgcctgctcgccgacgccgagaca
caggccgggcactggcaacagcgctggcaggacgaaggtgcgctgacgctggctgaaccc
gagctatcggcacagccgcaactggcgttgaatgaggccgccaacagcctggccagtgct
cagcgcgaaagcgatgcgttgcgtggccgcgagcagagtcagcagaccttgtttttgcag
ctgcagcaacgctcgagcgaggccgagcagcactggctgacggctctgacggccagtcct
ttcagcgatcttgcggcgtttctcgccgcgctgctggaggagggcgagcgagagcgtctg
gcggctttgcaggcacgtgtggagcgcgcgctgaccgaggcttcgacgctgttggctgcc
gccgacgcgcagctgcagcaactcagcgccacgccgcagaccgagttggcgcttggtgaa
ctggatgagcagttgcaggtactgcagagcgaattgcgtgcactgagccagcgccagggt
gagttgcgcgcgcagttgcaggccgacgagacgcggcgcagcagccagcaggcgctgttc
gccgaaatcagtgcgcaggagagtgagcagcgcctgtggcaacagctcaacggcctgatc
ggctcggccgacggcgccaagttccgcaagttcgcccagggcctgaccctcgatcacctg
atccatctggccaaccgccaactgacgcgcctgcacggccgctaccagttggcgcgcaag
ggtagcggcgaactcgagctggaggtgtgcgacacctggcaggctgatgtggcgcgcgac
tgccgtacgctgtccggtggcgagagtttcctggtcagcctggcgctggccttggcgctg
tccgatctggtcagccacaagaccagtattgattcgctgtttctcgatgaaggcttcggt
acgctggacggcgaaacgctggaggtggccctggatgcgctggacaacctcaacgccagc
ggcaagaccatcggtgtgatcagccatgtcgaggcgatgaaggagcgtattcccgtgcag
ttgcgggtgcacaagggcgtcggcctgggctacagccgactcgacgcacgttttgcggtg
aaggaaggagcatag
DBGET
integrated database retrieval system
