Ectopseudomonas chengduensis: QYM18_02555
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Entry
QYM18_02555 CDS
T09586
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pche
Ectopseudomonas chengduensis
Pathway
pche03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QYM18_02555 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pche03019
]
QYM18_02555 (pnp)
03016 Transfer RNA biogenesis [BR:
pche03016
]
QYM18_02555 (pnp)
Enzymes [BR:
pche01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QYM18_02555 (pnp)
Messenger RNA biogenesis [BR:
pche03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QYM18_02555 (pnp)
Transfer RNA biogenesis [BR:
pche03016
]
Prokaryotic type
tRNA degradation factors
QYM18_02555 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
KH_N4BP1_2nd
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
WKC37983
LinkDB
All DBs
Position
complement(536175..538280)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVAVTGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPEGFQNEVQVICTVVST
SKKTDPDIAAMIGTSAALAISGIPFNGPIGAARVAFHPETGYLLNPNYEQLKASSLDMVV
AGTKDAVLMVESEAKELTEDQMLGAVLFAHEEFQVVIQAVAELAAEAGKPTWDWQPKPEN
TALLNAIRGEFGDAISQAYTITIKQDRYARLGELRDQVVAKFSGEEGQPTAGEVKDAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRGLNIEVGVLDKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPYSVGECGRMGATGRREIGHGRLARRGVAAMLPSAD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVLEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIQGITEEIMEQALEQALEARLNILGQMNQ
VIAQSRSELSANAPTMLAMKIDQDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAAKQRVLAITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDQRV
EKVTDVLQEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaattccagttcggtcagtcgaccgttaccctcgagactggc
cgtatcgcccgtcaagcctccggcgcagtgctggtcaccgttgacgacgacgtcagcgtg
ctggtcgccgtaaccggcgccaagactgccgacccaagcaagggcttcttcccgctgtcc
gtgcactaccaggaaaagacctacgctgccggcaagatcccgggtggtttcttcaagcgt
gaagcgcgtccttccgagaaagaaaccctgacctcgcgtctgatcgaccgtccgatccgc
ccgctgttcccggaaggtttccagaacgaagtgcaggtcatctgcaccgtggtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggccgctctggctatc
tccggtatcccgttcaacggcccgatcggtgccgcgcgcgtcgccttccatccggaaact
ggctacctgctgaacccgaattacgagcaactcaaggcctccagcctggacatggtcgtg
gccggcaccaaggacgccgtgctgatggtcgagtcggaagccaaagagctaaccgaagac
cagatgttgggcgccgtgctgtttgcccatgaggagtttcaggtggtcatccaagctgtc
gccgagctggctgccgaagccggcaagccgacctgggactggcagccgaagccggaaaac
accgcactgctgaacgccatccgtggcgagttcggtgacgcgatttcccaggcctacacc
atcaccatcaagcaggaccgctacgcgcgtctgggcgagctgcgcgatcaggtcgtggcc
aagttctccggtgaagaaggccagcctactgccggtgaagtcaaagacgccttcggcgag
atcgaataccgcaccgtgcgcgagaacatcgtcaacggcaaaccgcgtatcgatggtcgt
gacactcgcaccgtgcgtggtctgaacatcgaagtcggtgtactggacaagacccacggt
tcggcgctgttcacccgtggcgaaacccaggcgctggtcgtggctaccctcggtaccgcc
cgcgacgcacagctgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccgccgtactcggtcggtgagtgtgggcgcatgggcgccactggccgccgc
gaaatcggccacggtcgtctcgcccgtcgtggcgttgccgccatgctgccgagcgccgac
gagttcccgtacaccatccgcgtggtgtcggaaattaccgagtccaacggttcttcctcc
atggcttcggtgtgcggtgcctccctggcgctgatggacgccggtgtgccgatgaaggca
ccggttgccggtatcgccatgggtctggtgctggaaggtgagaaattcgccgtgctgacc
gacatcctcggtgacgaagatcacctgggcgacatggacttcaaggtagccggtaccgcc
aagggcgtcaccgcgctgcagatggacatcaagatccagggcatcaccgaagagatcatg
gagcaggcgctggagcaggcgctggaagcgcgcctgaacatcctcggccagatgaaccag
gtcatcgcccaatcgcgcagcgaactgtcggcaaacgctccgaccatgctggcgatgaag
atcgaccaggacaagatccgcgacgtgatcggcaagggtggcgccaccatccgcgcgatc
tgcgaagagaccaaggcttcgatcgatatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcggccgaggctgccaagcagcgcgtactggccattaccgcggaagcc
gagatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggtgccttcgtc
aacatcctgccgggcaaggacggtctggtgcacatctccatgctgagcgatcagcgcgtg
gagaaggtcaccgacgtgctgcaggaaggccaggaagtgaaggtattggtgctggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaggacgtagctgctgccgaggcctctggc
gtctaa
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