Pseudomonas chengduensis: QYM18_03625
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Entry
QYM18_03625 CDS
T09586
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pche
Pseudomonas chengduensis
Pathway
pche00550
Peptidoglycan biosynthesis
pche01100
Metabolic pathways
pche01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QYM18_03625 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QYM18_03625 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pche01011
]
QYM18_03625 (mrdA)
Enzymes [BR:
pche01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QYM18_03625 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pche01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
QYM18_03625 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WKC38185
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All DBs
Position
complement(767244..769136)
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AA seq
630 aa
AA seq
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MPQPIRLKDHEKDARLVKRRVLVGGVVIILLTCVLIMRMYYLQVVQYEHHSTLAENNRIH
VQPLPPTRGLIFDRNGVIIADNRPSFSLTVTRERAGDWLSVLDTVVEVLELSEDERVLFE
RRVRQGRRPFEPVPILFELSEEQIARIAVNQFRLPGVEVAAQLVRHYPQQEHFAHSVGYV
GRINEQELKRLDPTDYAGTHHIGKTGIERFYEDELHGEVGYEEVETNARGRVLRVLKRVD
PKPGKDIVLSLDVQLQEAAENALGGRRGAVVAIDPNNGEVLAMVSQPSFDPNPFVTGISF
KAYGELRDSIDQPLYNRVLRGLYPPGSTIKPMVAVAGLDAGVVTPTSRVFDPGFYQLPNH
SHKYRNWNRTGDGWVDLNLAIARSNDTYFYDLAHKMGVDRMHDYMSRFGLGQRVALDMFE
ETAGLMPSRDWKRARYRQPWYPGETLILGIGQGYMQTTPLQLAQATVLMATRGKWIRPHL
AKSVDGRLPADPNPMPDIVLRDPKFWDYGIHGMEEVLHGPRGTARKVGDSSVYRIAGKSG
TAQVVAIKQGEKYDRNKVQERHRDHALFVGFAPAQKPQIAVAVMVENGESGSGVAAPVVK
QVMDAWLLDKETGQLKAEFALPQTAEVSQR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgattcgcctcaaggatcacgaaaaggacgctcgcctggtcaagcgccgg
gtgctcgtcggcggggtggtgatcatcctgctgacgtgcgtgctgatcatgcgcatgtac
tacctgcaggtcgtgcagtacgagcatcacagcaccctggcggaaaacaatcgcatccac
gtgcagccgctgccgccgacccgtgggctgatcttcgaccgcaatggggtgatcatcgcc
gacaaccgtcccagcttcagcctgaccgtaacccgcgagcgcgccggtgactggttgagc
gtgctcgatacggtagtcgaggtgctcgagctttccgaggatgagcgcgtgctgttcgag
cgccgcgtgcgccaggggcggcgtccgttcgagccggtaccgatcctgttcgagctgtcc
gaagagcagatcgctcgtattgcggtcaaccagttccgcctgccgggcgtcgaggtcgcc
gcgcagctggtgcggcattacccgcagcaggaacacttcgctcattcggtcggctacgtc
gggcgcatcaacgagcaggagctcaagcgtctggatccgaccgattacgccggtacccac
catattggcaagaccggtatcgagcgtttctacgaggacgagttgcacggcgaagtcggc
tacgaagaggtcgagaccaatgcgcgtggtcgcgtgctgcgggtgctcaagcgcgtcgat
ccgaaaccgggcaaggacatcgtgctcagcctcgatgtacagctgcaggaggcggcggag
aacgccctgggtggtcgacgtggagcagtggtggccatcgatccgaataatggtgaagta
ctggcgatggtcagtcagcccagcttcgaccccaatcccttcgtcaccggtatcagcttc
aaggcctatggcgagctgcgcgactccatcgatcagccgctttataaccgggtgctgcgc
ggcctctatccaccaggctcgaccatcaaaccgatggttgctgtggccggtctcgatgca
ggggtggtcactcccacttcgcgggtgttcgaccccggtttctatcagttgcccaatcac
agccacaaataccgtaactggaaccgcaccggtgacggctgggtcgatctcaacctggcc
attgcccgctccaatgacacctatttctatgatctggcgcacaagatgggcgttgatcgc
atgcatgactacatgagccgcttcggcctcggtcagcgcgtggcgctggacatgttcgag
gaaaccgccggcctgatgccttcgcgtgactggaagcgggcacgttatcgtcagccctgg
tacccgggcgagacgctgattctcggcattggccagggctacatgcagaccacgccgctg
cagttggcgcaggccaccgtgctgatggccacgcgcggcaagtggattcgtccgcacctg
gccaagagcgtcgacggccgcctgcctgctgaccccaatccgatgcccgatatcgtcctg
cgtgatccgaaattctgggattacggcattcacggcatggaagaggtattgcacggccct
cgcggtaccgcgcgcaaggtcggtgacagttcggtctaccgcatcgctggcaagagcggt
acggcgcaggtggtggcgatcaagcagggtgagaagtacgaccgcaacaaggtgcaggag
cgccaccgtgaccacgccctgttcgtcggttttgcgccggcgcagaagccgcagatcgcc
gtagcggtcatggtggaaaacggcgagtcaggctctggcgtcgccgccccggtggtcaag
caggtgatggacgcctggctgctggataaagagaccggtcagctcaaagccgaattcgcc
ttgccccagactgccgaggtcagccagcgatga
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