KEGG   Ectopseudomonas chengduensis: QYM18_04230
Entry
QYM18_04230       CDS       T09586                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
pche  Ectopseudomonas chengduensis
Pathway
pche03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pche00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QYM18_04230 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pche03400]
    QYM18_04230 (uvrA)
DNA repair and recombination proteins [BR:pche03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QYM18_04230 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      QYM18_04230 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 BCA_ABC_TP_C AAA_16 AAA_23 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG nSTAND3 Viral_helicase1 cobW Zn_ribbon_8 AAA_25
Other DBs
NCBI-ProteinID: WKC38303
LinkDB
Position
894674..897508
AA seq 944 aa
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARAGIPRC
PDHDVPLEAQTVSQMVDQVLALPEGRKLMLLAPVVRERKGEHLSVFEELRAQGFVRARVN
GKLFELDELPKLDKQKKHSIDVVVDRFKVREDLQQRLAESFETALGLADGIALIAPMDDE
PGEEIIFSARFACPHCGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDVKRLVNGELT
LAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEEPFDDLAAEHQKVILFGSGTQSVDFKYL
NDRGDIVKRSHPFEGIIPNLERRYRETESASVREELAKFLSTQPCPDCRGTRLRREARHV
WVGEKTLPAVTGLPVGDACDYVANLHLTGRRGEIAEKILKEIRERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLNHLRNLGNTV
IVVEHDEDAIRMADYVVDIGPGAGVHGGRIVAEGTPDEVMNHPDSLTGKYLSGREKIRYP
AQRTPRDKKKLLKLKGARGNNLRNVDLEIPVGLLTCITGVSGSGKSTLINNTLFPLTATA
LNGATTLEAAPHDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEVKYK
GKSITEVLDMTIEEARAFFDAVPAIARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGMIIATGTPEDVADNPTSHTGHFLKPLLERDRA
NT seq 2835 nt   +upstreamnt  +downstreamnt
gtggacaaaatcctgatccgtggggctcgcacccacaatctgaagaacatcgacctgact
ctgccgcgcgacaagctgatcgtgatcaccggcctgtccggctccggcaagtcctctctg
gccttcgataccctttacgcggaaggccagcgccgttacgtcgagtcgctgtcggcttac
gcccggcagttcctgtcgatgatggaaaagcccgatgtcgacaccatcgaaggcctgtca
ccagcgatttccatcgagcagaaatctacctcgcacaacccgcgctcgaccgtcggcacc
atcaccgaaatctacgactacctgcgcctgctgtatgcccgcgccggcattccgcgctgc
ccggaccatgacgtgccgctcgaggcgcaaaccgtcagccagatggtcgaccaggtcctg
gccctaccggaaggccgcaagctgatgctgctggcaccggtggtccgcgagcgcaagggc
gaacatctgtcggtgttcgaggagctgcgcgcccagggtttcgtccgtgcacgggtcaac
ggcaaactgttcgagctggacgagctgcccaagctggacaagcagaagaagcattccatc
gacgtggtggtggaccgcttcaaggtccgtgaagatctgcagcagcgtctggccgagtct
ttcgagaccgccctcggcctggccgacggcatcgccctgatcgctcccatggatgatgag
ccgggcgaagagatcatcttctccgcgcgcttcgcctgcccgcactgcggccactcgatc
agcgagctggagcccaagctgttctccttcaacaacccggccggcgcctgcccgacctgc
gacggcctgggcgtgaagcagttcttcgacgtcaaacgcctggtcaatggcgaactgacc
ctggccgaaggcgccatacgcggctgggacagacgcaacgtctactacttccagatgctc
ggttcgctggccgcgcactatggcttcagcctcgaagagcccttcgacgacctggccgcc
gaacaccagaaagtcatcctgttcggcagcggtacgcagagcgtcgacttcaagtacctc
aacgaccgcggcgacatcgtcaaacgctcgcaccccttcgagggcatcattcccaacctc
gagcgccgctaccgtgagaccgagtcggccagcgtgcgcgaggagttggccaagttcctc
agcacccagccctgccccgattgccggggcacgcgcctgcgccgcgaagcgcggcatgtc
tgggtcggcgaaaagaccctgccggcggtgaccggcttgccggtcggcgacgcctgcgat
tacgtcgccaacctgcacctgaccggccgccgcggcgagatcgccgagaaaatcctcaag
gaaatccgcgagcgtctgcagttcctggtcaacgtcggcctcgattatctgaccctggat
cgcagcgccgacaccctgtccggcggcgaagcgcagcgcatccgcctggccagccagatc
ggcgccggcctggtgggcgtgatgtacatcctcgatgaaccgtccatcggcctgcaccag
cgcgacaacgagcgcctgctgggcaccctcaaccacctgcgcaacctgggcaatacggtg
atcgtggtcgagcacgacgaagacgccatccgcatggccgattacgtggtcgatatcggc
ccgggcgccggcgtgcatggcggccgcatcgtcgccgaaggcacgccggacgaggtgatg
aatcaccccgactcgctgaccggcaaatacctgtccggccgtgagaagatccgctatccg
gcgcagcgcaccccgcgtgacaagaagaaactgctcaagctcaagggcgcacggggcaac
aacctgcgcaatgtcgatctggagattccggtaggtctgctcacctgcatcaccggcgtg
tccggctcgggcaagtcgacgctgatcaacaacaccctgttcccgctcactgctacggca
ctgaacggtgcgaccaccctggaagcggcgccgcacgattccttcgacggcctgcagcac
ctggacaaggtggtcgacatcgaccagagcccgatcggccgcacgccgcgctccaacccg
gctacctacacaggcctgttcacaccgatccgcgaactcttcgccggtgtgccggaatcg
cgctcgcgcggttatggcccgggccgtttcagcttcaacgtcaagggcgggcgctgcgag
gcgtgccagggcgacggcgtgatcaaggtggaaatgcactttctgccggacatctacgtg
ccgtgcgacgtgtgcaagggcaagcgctacaaccgcgaaactctggaagtgaagtacaag
ggcaagagcatcactgaagtgctggacatgaccatcgaggaagctcgcgccttcttcgac
gccgtaccggccatcgcccgcaagctgcagacactgatggacgtcggtctgtcctacatc
aagctgggccagagcgcgaccaccctgtccggcggcgaggcgcagcgggtcaagctgagc
cgcgagttgagcaagcgcgataccggcaagaccctgtatatcctcgacgaaccgaccacc
ggcctgcacttcgccgatatccagcaactgctcgatgtgctgcaccgcctgcgcgaccac
ggcaataccgtggtagtgatcgagcacaacctggacgtgatcaagaccgccgactggctg
gtggatctcggccccgagggcggctccaagggcggcatgatcatcgccaccggcacaccg
gaggacgtggccgacaacccgacatcacacaccggacacttcctcaaaccgttgctggaa
cgcgaccgcgcctga

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