Ectopseudomonas chengduensis: QYM18_04230
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Entry
QYM18_04230 CDS
T09586
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pche
Ectopseudomonas chengduensis
Pathway
pche03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QYM18_04230 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pche03400
]
QYM18_04230 (uvrA)
DNA repair and recombination proteins [BR:
pche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QYM18_04230 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QYM18_04230 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
BCA_ABC_TP_C
AAA_16
AAA_23
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
cobW
Zn_ribbon_8
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WKC38303
LinkDB
All DBs
Position
894674..897508
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARAGIPRC
PDHDVPLEAQTVSQMVDQVLALPEGRKLMLLAPVVRERKGEHLSVFEELRAQGFVRARVN
GKLFELDELPKLDKQKKHSIDVVVDRFKVREDLQQRLAESFETALGLADGIALIAPMDDE
PGEEIIFSARFACPHCGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDVKRLVNGELT
LAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEEPFDDLAAEHQKVILFGSGTQSVDFKYL
NDRGDIVKRSHPFEGIIPNLERRYRETESASVREELAKFLSTQPCPDCRGTRLRREARHV
WVGEKTLPAVTGLPVGDACDYVANLHLTGRRGEIAEKILKEIRERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLNHLRNLGNTV
IVVEHDEDAIRMADYVVDIGPGAGVHGGRIVAEGTPDEVMNHPDSLTGKYLSGREKIRYP
AQRTPRDKKKLLKLKGARGNNLRNVDLEIPVGLLTCITGVSGSGKSTLINNTLFPLTATA
LNGATTLEAAPHDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEVKYK
GKSITEVLDMTIEEARAFFDAVPAIARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGMIIATGTPEDVADNPTSHTGHFLKPLLERDRA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggacaaaatcctgatccgtggggctcgcacccacaatctgaagaacatcgacctgact
ctgccgcgcgacaagctgatcgtgatcaccggcctgtccggctccggcaagtcctctctg
gccttcgataccctttacgcggaaggccagcgccgttacgtcgagtcgctgtcggcttac
gcccggcagttcctgtcgatgatggaaaagcccgatgtcgacaccatcgaaggcctgtca
ccagcgatttccatcgagcagaaatctacctcgcacaacccgcgctcgaccgtcggcacc
atcaccgaaatctacgactacctgcgcctgctgtatgcccgcgccggcattccgcgctgc
ccggaccatgacgtgccgctcgaggcgcaaaccgtcagccagatggtcgaccaggtcctg
gccctaccggaaggccgcaagctgatgctgctggcaccggtggtccgcgagcgcaagggc
gaacatctgtcggtgttcgaggagctgcgcgcccagggtttcgtccgtgcacgggtcaac
ggcaaactgttcgagctggacgagctgcccaagctggacaagcagaagaagcattccatc
gacgtggtggtggaccgcttcaaggtccgtgaagatctgcagcagcgtctggccgagtct
ttcgagaccgccctcggcctggccgacggcatcgccctgatcgctcccatggatgatgag
ccgggcgaagagatcatcttctccgcgcgcttcgcctgcccgcactgcggccactcgatc
agcgagctggagcccaagctgttctccttcaacaacccggccggcgcctgcccgacctgc
gacggcctgggcgtgaagcagttcttcgacgtcaaacgcctggtcaatggcgaactgacc
ctggccgaaggcgccatacgcggctgggacagacgcaacgtctactacttccagatgctc
ggttcgctggccgcgcactatggcttcagcctcgaagagcccttcgacgacctggccgcc
gaacaccagaaagtcatcctgttcggcagcggtacgcagagcgtcgacttcaagtacctc
aacgaccgcggcgacatcgtcaaacgctcgcaccccttcgagggcatcattcccaacctc
gagcgccgctaccgtgagaccgagtcggccagcgtgcgcgaggagttggccaagttcctc
agcacccagccctgccccgattgccggggcacgcgcctgcgccgcgaagcgcggcatgtc
tgggtcggcgaaaagaccctgccggcggtgaccggcttgccggtcggcgacgcctgcgat
tacgtcgccaacctgcacctgaccggccgccgcggcgagatcgccgagaaaatcctcaag
gaaatccgcgagcgtctgcagttcctggtcaacgtcggcctcgattatctgaccctggat
cgcagcgccgacaccctgtccggcggcgaagcgcagcgcatccgcctggccagccagatc
ggcgccggcctggtgggcgtgatgtacatcctcgatgaaccgtccatcggcctgcaccag
cgcgacaacgagcgcctgctgggcaccctcaaccacctgcgcaacctgggcaatacggtg
atcgtggtcgagcacgacgaagacgccatccgcatggccgattacgtggtcgatatcggc
ccgggcgccggcgtgcatggcggccgcatcgtcgccgaaggcacgccggacgaggtgatg
aatcaccccgactcgctgaccggcaaatacctgtccggccgtgagaagatccgctatccg
gcgcagcgcaccccgcgtgacaagaagaaactgctcaagctcaagggcgcacggggcaac
aacctgcgcaatgtcgatctggagattccggtaggtctgctcacctgcatcaccggcgtg
tccggctcgggcaagtcgacgctgatcaacaacaccctgttcccgctcactgctacggca
ctgaacggtgcgaccaccctggaagcggcgccgcacgattccttcgacggcctgcagcac
ctggacaaggtggtcgacatcgaccagagcccgatcggccgcacgccgcgctccaacccg
gctacctacacaggcctgttcacaccgatccgcgaactcttcgccggtgtgccggaatcg
cgctcgcgcggttatggcccgggccgtttcagcttcaacgtcaagggcgggcgctgcgag
gcgtgccagggcgacggcgtgatcaaggtggaaatgcactttctgccggacatctacgtg
ccgtgcgacgtgtgcaagggcaagcgctacaaccgcgaaactctggaagtgaagtacaag
ggcaagagcatcactgaagtgctggacatgaccatcgaggaagctcgcgccttcttcgac
gccgtaccggccatcgcccgcaagctgcagacactgatggacgtcggtctgtcctacatc
aagctgggccagagcgcgaccaccctgtccggcggcgaggcgcagcgggtcaagctgagc
cgcgagttgagcaagcgcgataccggcaagaccctgtatatcctcgacgaaccgaccacc
ggcctgcacttcgccgatatccagcaactgctcgatgtgctgcaccgcctgcgcgaccac
ggcaataccgtggtagtgatcgagcacaacctggacgtgatcaagaccgccgactggctg
gtggatctcggccccgagggcggctccaagggcggcatgatcatcgccaccggcacaccg
gaggacgtggccgacaacccgacatcacacaccggacacttcctcaaaccgttgctggaa
cgcgaccgcgcctga
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