Ectopseudomonas chengduensis: QYM18_05420
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Entry
QYM18_05420 CDS
T09586
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pche
Ectopseudomonas chengduensis
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pche03021
]
QYM18_05420 (rpoH)
Transcription machinery [BR:
pche03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QYM18_05420 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
WKC38525
LinkDB
All DBs
Position
complement(1145903..1146757)
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AA seq
284 aa
AA seq
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MSTSLQPVHALVPGANLEAYVHAVNSIPLLTPEQERELAENLFYQQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIRAEIHEFILK
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVTAVAASLGVEPHEVREMESRLTGQD
MAFDPAADADDDSAFQSPAHYLEDHRYDPARQLEDADWSDSSSSNLHEALESLDERSRDI
LYQRWLAEEKATLHDLAAKYNVSAERIRQLEKNAMNKLKGCIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttccttgcaacctgttcatgctctggttccaggcgccaacctggaagcgtac
gtgcatgcggtcaacagcattccgctgctgacgcccgagcaggagcgtgaactggccgaa
aatctcttttaccagcaggatctcgaggccgcccgccagatggtgttggcccacctgcgt
ttcgtggtgcatatcgcccgtagctactcgggttatggtctggcccaggccgacctgatc
caggaaggcaatgtcggcctgatgaaggcggtcaagcgcttcaacccggaaatgggcgtg
cgtctggtgtccttcgccgtgcactggatccgtgcggaaatccacgagttcatcctgaag
aactggcgcatcgtcaaagtggccaccaccaaggcccagcgcaaactgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaacgatgaagtcaccgccgtggccgca
agcctgggcgtcgagccgcacgaagtgcgcgagatggaaagtcgcctgaccggccaggac
atggccttcgacccggccgccgatgccgacgacgacagtgccttccagtcgcctgcgcat
tacctggaagaccatcgttacgacccggctcgtcagctcgaggatgccgattggagcgac
agttccagcagcaacctgcacgaagcgctggaaagcctggacgagcgcagccgcgacatc
ctctaccagcgctggctggccgaggagaaggcgacgctgcatgatctggccgccaagtac
aatgtgtcggccgagcgtattcgtcagctcgagaagaacgcgatgaacaagctcaagggc
tgtattgccgcctga
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