KEGG   Ectopseudomonas chengduensis: QYM18_07340
Entry
QYM18_07340       CDS       T09586                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pche  Ectopseudomonas chengduensis
Pathway
pche03030  DNA replication
pche03430  Mismatch repair
pche03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pche00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    QYM18_07340
   03430 Mismatch repair
    QYM18_07340
   03440 Homologous recombination
    QYM18_07340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pche03032]
    QYM18_07340
   03400 DNA repair and recombination proteins [BR:pche03400]
    QYM18_07340
Enzymes [BR:pche01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     QYM18_07340
DNA replication proteins [BR:pche03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     QYM18_07340
DNA repair and recombination proteins [BR:pche03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     QYM18_07340
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: WKC38892
LinkDB
Position
1553408..1554115
AA seq 235 aa
MSERTAQDWPQLFASLADSSRDPRLRAYYGAGCVAADTPLQDVPLVALDVETTGLDPREN
AIVSLGLVPLSLQRIRCSESRYWVVKPTGELNAESVTFHHITHSDIRHAPRLASVLDELL
EAMAGKVVVAHYRNIERSFLDQAVRQHLGEGLIFPIIDTMELEARLHPKRTVGWWDRLRG
RQPISIRLADSRLRYGLPLYSAHHALTDALACGELLQAQVATHYPGRTPISALWS
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagtgagcgcacggcccaggactggccgcaactgttcgccagcctcgccgacagcagc
cgcgacccgcgcctgcgcgcctactacggcgccggctgcgtcgccgccgatacgccgctg
caggatgtcccgctggtggcactggacgtggaaaccaccggcctagaccctcgcgaaaac
gccatcgtcagcctcggcctggtaccgctgagcctgcaacgcatccgctgcagcgagtcg
cgctattgggtggtcaagcccaccggcgagctaaacgccgaatcggtcaccttccaccac
atcacccacagcgacatccgccacgccccgcgcctggccagcgtgctggacgagttgctc
gaagcaatggccggcaaggtggtggtggcgcactaccgcaacatcgaacgcagcttcctc
gaccaggccgtacgccagcacctgggcgaagggctgatctttcccatcatcgacaccatg
gaactggaagcccgcctgcaccccaaacgcaccgtgggctggtgggaccgcctgcgcggc
cgacagccaatttccatccgcctggccgacagccgcctgcgctacggcctgccgctgtac
tcggcacaccatgcgctgaccgacgcgctggcctgtggagagttgctgcaggcgcaggtg
gcgacgcactatccggggcgtacaccgatcagcgctctctggagctga

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