KEGG   Ectopseudomonas chengduensis: QYM18_08090
Entry
QYM18_08090       CDS       T09586                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
pche  Ectopseudomonas chengduensis
Brite
KEGG Orthology (KO) [BR:pche00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pche03000]
    QYM18_08090
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pche02044]
    QYM18_08090
Transcription factors [BR:pche03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    QYM18_08090
Secretion system [BR:pche02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   QYM18_08090
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 GAF_2 AAA_2 HTH_30 GAF Mg_chelatase AAA_16 AAA HTH_50 GAF_3
Other DBs
NCBI-ProteinID: WKC39038
LinkDB
Position
1718235..1719764
AA seq 509 aa
MFAEVPQPLRYAEALLGRYAELAGAASSERLLANLVRATAELADCALGQLYLLDHTNTRL
TLSAEWLDGLLQPRESASLPSDYDGEQLLQYCLCQNQVLCIDELDSGLHNIACLPEGSRA
WRSLLCLPLHDGVGRTRGLLLVASHERRILQGFAASFAQLGSFALAQLQLLQRLRAPAVD
GAASAASVSSVPGTPCASGYGLLGQSPAMRRVYQLIGKVLHSPVSVLLTGETGTGKELVA
RAIHDCGARRSKAFIVQNCAALPENLLESELFGYRKGAFTGADRDKPGLFDAADGGTLFL
DEIGDMPLTLQAKLLRVLQEGEVRPLGSSETHKVDVRIVAATHQELRKRVEEGRFREDLF
YRLSHFPIELPALRERDEDILLLARHFASTASGLLQRDACRWSDAALEHLAGYAFPGNVR
ELKGVVERAVLLCEGGELLPEHFNLEQTQSEGSEPLSLRERMDRLERNLLLDCLRKNRGN
QTNAANELGLPRRTLLYRMQRLKISPSEV
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgttcgccgaagttccgcaaccgcttcgctacgccgaagccctgcttggccgctatgcc
gaactggccggcgctgccagcagtgagcgcctgctcgccaacctggtgcgtgccacggcc
gaacttgccgactgtgcgctgggccagctgtatctgctggaccataccaacacccgcctg
accctctcggccgagtggctcgacggcctgctgcaaccgcgtgagtcagccagcctgccc
agtgactatgacggcgaacagctgctgcagtactgcctgtgccagaaccaggtgctgtgt
atcgacgaactcgacagcggtctgcacaacatcgcctgtctgccggaaggcagccgtgcc
tggcgcagcttgctgtgcctgccgctgcatgacggcgttggccgtactcgtggtctgctg
ttggtggccagccatgagcggcgaatcctgcagggctttgccgcctctttcgcccagctt
ggcagtttcgccttggctcagctgcagctgttgcagcgtctacgtgcaccagctgtcgac
ggtgccgccagtgctgcaagcgtctcgtctgttccaggcacgccctgtgccagcggctac
ggcctgctcggccagagcccggccatgcgccgcgtctaccaactgatcggcaaggtgctg
cacagcccggtcagcgtgctgctcaccggcgagaccggcaccggcaaggaactggtcgct
cgcgccatccacgattgcggcgcgcggcgtagcaaggcgttcatcgtgcagaactgcgcc
gcgctgccggaaaacctgctggagagcgagctgttcggctaccgcaagggcgcctttacc
ggcgccgaccgtgacaagccgggcctgttcgatgcggccgatggcggcaccctgtttctc
gacgagatcggcgacatgccgctgaccctgcaagccaagctgctgcgcgtgctgcaggag
ggcgaagtgcgccccctgggcagcagcgagacgcacaaggtcgacgtgcgcatcgtcgcc
gccacccaccaggagctgcgcaaacgtgtcgaggaaggccgcttccgcgaagacctgttc
tatcgcctatcgcatttccccatcgagttgccggcgctgcgcgagcgtgacgaagacatc
ctgttgctcgcgcgtcacttcgccagcactgccagcggcctgctgcagcgtgacgcctgc
cgctggagcgatgccgctctggagcatctggccggctacgccttccccggcaacgtgcgt
gagctcaagggtgtggtcgagcgcgccgtgctgctctgcgaaggcggcgagttgctgccc
gagcacttcaatctggagcagacccagagcgaaggcagcgaaccgctgagcctgcgcgag
cgcatggatcggcttgagcgcaacctgctgctcgactgcctgcgcaagaaccgcggcaac
cagaccaacgccgccaacgagctgggtctgccccggcgcaccctgctgtaccgcatgcaa
cggctgaagatcagcccgagcgaggtctga

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