Ectopseudomonas chengduensis: QYM18_09065
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Entry
QYM18_09065 CDS
T09586
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pche
Ectopseudomonas chengduensis
Pathway
pche00300
Lysine biosynthesis
pche00470
D-Amino acid metabolism
pche01100
Metabolic pathways
pche01110
Biosynthesis of secondary metabolites
pche01120
Microbial metabolism in diverse environments
pche01230
Biosynthesis of amino acids
Module
pche_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QYM18_09065 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QYM18_09065 (dapF)
Enzymes [BR:
pche01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QYM18_09065 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WKC39222
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All DBs
Position
complement(1925495..1926325)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLISQHAHVQPKHAKQWGDRHIGVGFDQLLIVEPPSHPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKKVIRVETKSGIIELRVQNDGQVCVNM
GAPRLQPEQVPFQADQAALTYHVDVEGQSVELAALSMGNPHAVLRVDSIDDAPVHTLGPK
LEHHPRFPQRVNVGFLQIQDRQRARLRVWERGAGETLACGTGACAAAVAAIRQGLMDSPV
QLELPGGKLSIEWAGEGQPVMMTGPAARVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctattgcgctttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
atcagtcagcacgcccacgtgcaacccaagcatgccaaacaatggggcgaccgccacatc
ggtgtcggtttcgaccaactgctgatcgtcgagccgccgagtcacccggatgtcgacttc
cgttaccgcatcttcaactccgacggctcggaagttgagcaatgcggcaacggtgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccaccaagaaggtcattcgcgtcgag
accaagagcggcatcatcgagctgcgcgtgcagaacgatggccaggtctgcgtcaacatg
ggcgcaccgcgcctgcagccggaacaggtgccgttccaggccgaccaggccgcgctgacc
tatcacgtcgacgtcgagggtcagagcgtagagctggccgcgctgtcgatgggcaacccg
catgcggtgctgcgcgttgatagcatcgatgacgcaccggtgcatacgctcgggccgaag
ctagaacatcatccgcgcttcccgcagcgggtcaacgtcggcttcctgcagatacaggat
cgtcagcgtgcgcgcctgcgcgtgtgggagcgtggtgccggcgaaaccctggcctgcggc
accggcgcctgcgccgcggccgtcgcggccattcgccagggcttgatggattcgcccgtg
caactggaactgccaggcggcaaactgtccatcgaatgggcaggcgagggtcagccggtt
atgatgaccgggcccgctgcccgcgtatacgaaggacaggttcgcctatga
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