Ectopseudomonas chengduensis: QYM18_10390
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Entry
QYM18_10390 CDS
T09586
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
pche
Ectopseudomonas chengduensis
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pche03000
]
QYM18_10390
Transcription factors [BR:
pche03000
]
Prokaryotic type
Helix-turn-helix
Other families
QYM18_10390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
PAS_4
PAS_8
AAA
AAA_5
PAS_3
AAA_16
Mg_chelatase
AAA_2
bpMoxR
HTH_8
TIP49
AAA_22
GAF
AAA_29
DUF815
AAA_3
Motif
Other DBs
NCBI-ProteinID:
WKC39479
LinkDB
All DBs
Position
complement(2217546..2219477)
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AA seq
643 aa
AA seq
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MPDPTAASQLLMQHMQSASLVIDPTHDRILHANPACCALLGWPLDELLALRASRLWAHDL
GALVTFTEEVQVRGNAWRDGLGLLRRDGERLEVEIDGSRLEHDSVILLGLLIQQRRRLDA
LRGLAEAERYQRQGLLEWQGVERIFRQFERQNQLILGAAGEGIYGVNRNGETTFVNPAAE
RILGWRADDLIGHNIHDLIHHHHPDGSTYDGHTCPIYAAFNDGEVHQVADEVFWNKDGKP
IPVDYTSTPLRDDGELVGAVVVFRDISERLETERRLRQALSEVQQLKQRLELENAYLQEE
IRGEYAQHDLVGRSAAMQQVIHQIELVAPTGANVLITGESGTGKELIARAIHDNSGRSRR
PLIRVNCAAVPRELFESEFFGHIRGAFTGALNDRVGRFELADGGTLFLDEVGEIPLELQS
KLLRVLQEQQLERVGDTRTRQVDVRVIAATNRDLRQEVRAGRFREDLYFRLNVFPIESAP
LRQRPEDIPPLAQHFLSRACRQLNRPEPSLRLADIQRLQAYSWPGNIRELENLIERAVII
SPGTRLRLDLPNDSGNDAPSQPQVEQEMRIFTQGEQRRQMRENLIAALKACAGRISGKDG
AARLLELKPTTLRSRLESFAIDPRDYRPRRSQPRRYETSQTPR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatccaactgccgccagccaattgctgatgcaacacatgcagagcgccagcctg
gtcatcgatcccacccacgaccgcatcctgcatgccaatccagcctgctgcgctctactc
ggctggccgctggatgaactgctcgcactgcgcgccagccgtctctgggcgcatgacctg
ggggcactggtcaccttcaccgaagaggtgcaggtgcgcggcaatgcctggcgtgacggc
ctcgggctgctgcgtcgcgacggcgagcgcctggaagtggaaatcgacggcagccggctg
gagcatgacagcgtcatactgctcggcctgctgatccagcagcgccgccgcctcgacgcc
ctgcgcgggctggccgaagccgagcgctatcaacgtcagggtctgctcgaatggcagggc
gtggaacgcatcttccgccagttcgagcggcagaatcagttgatcctcggcgccgccggc
gagggcatctacggcgtcaaccgtaatggcgagaccaccttcgtcaatccggcggccgag
cgcattctcggctggcgtgccgacgacctgatcggccataacattcacgacctgattcac
caccaccatcccgacggcagcacctacgacggccatacctgcccaatctacgccgccttc
aacgacggcgaggtgcatcaggtggccgacgaggtgttctggaacaaggatggcaagccg
atcccggtggattacaccagcacgccgctgcgcgacgacggtgagctggtcggtgccgtg
gtggtgtttcgtgacatcagcgagcgcctggagaccgagcgccggctgcgccaggcactg
agcgaggtgcagcaactcaagcaacgcctggagctggagaatgcctacctgcaggaagag
attcgtggcgagtacgcccagcacgacctggttgggcgcagcgccgccatgcagcaggta
atccatcagatcgagctggtcgcccccaccggcgccaacgtactgatcactggcgagtca
ggcaccggcaaggagctgatcgcccgcgccattcacgacaacagcgggcgcagccgccgc
ccactgatccgggtgaactgcgctgcagtgccgcgcgaactgttcgagagcgagttcttc
ggccatatccgcggcgccttcaccggcgcgctgaacgaccgcgtcgggcgcttcgaactg
gcagacggcggcacgctgtttctcgacgaggtcggcgaaatccccttggagctgcagagc
aagctgctgcgcgtgctgcaggaacagcagctggagcgggtcggcgacacccgcacacgc
caggtcgacgtgcgcgtgatcgctgccaccaaccgtgacctgcgccaggaagtacgtgcc
ggccgcttccgcgaagacctgtactttcgcctcaacgtcttccccatcgagtcggcgccg
ctgcgtcagcgcccggaagacattccgccgctagcccagcactttctcagccgcgcctgt
cgccagctcaaccgccctgagcccagcctgcgcctggccgacatccaacgcctgcaggcc
tactcctggccgggcaacattcgtgagctggagaacctgatcgagcgcgcggtgatcatt
tcacccggcacccggctgcgccttgatctgcccaacgacagcggtaacgacgcgccgtca
cagccacaggtggaacaggaaatgcggattttcactcagggcgagcaacgccggcagatg
cgcgaaaacctgatcgcagcactgaaggcctgtgcgggcaggatatcggggaaggacggc
gcggcgcggttgctggagctgaagccaacgaccctgcgctcacgcctggagagtttcgcc
atcgacccgcgcgactacagaccacgtaggtcgcagccgcgcaggtacgagacgagtcag
acgccgaggtag
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