Ectopseudomonas chengduensis: QYM18_13085
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Entry
QYM18_13085 CDS
T09586
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pche
Ectopseudomonas chengduensis
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pche03400
]
QYM18_13085 (phrB)
Enzymes [BR:
pche01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
QYM18_13085 (phrB)
DNA repair and recombination proteins [BR:
pche03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
QYM18_13085 (phrB)
Prokaryotic type
QYM18_13085 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
WKC35412
LinkDB
All DBs
Position
complement(2815068..2816504)
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AA seq
478 aa
AA seq
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MQQLMWFRSDLRTQDNTALSRAMSSGATIALYLVTPGQWQRHDDAASKVDFWLRNLAELS
KALAALNVPLLVRHCQDWSEAPVQVAEVCHEHDISAVHVNEEYGVNESLRDQQVCAYLGQ
QAIAWHSHLDQLFFKPGSVLTRSGGYFQVYSQFRKVCYERLHTALPALITPPKAQTPLAI
GSEAIPETVEGFATPSASLRLLWPAGEEAALQRLQRFSDEQITYYKDERDFPAKPGTSQL
SAYLAAGVVSPRQCLHAALASNRGEFDSGNPGVVTWINELLWREFYKHTLVGYPRVSRHR
AFRLETEAVPWRHAPEDLAAWQEGRTGLPIIDAAMRQLLETGWMHNRLRMIVAMFLTKNL
LIDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPISQSQKFDPEGQFI
RQWVPELAGLNKRDIHDPSALGGLFAPAGYPRPIVDLSRSRERALAAFKNLSAREVPA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaactgatgtggtttcgcagcgacctgcgcacccaggacaacaccgccctgagc
cgcgccatgagcagcggcgcgaccatcgccctgtatctcgtcacgcccggccagtggcag
cgccatgacgatgccgcgagcaaggtggacttctggctgcgcaacctggcggagctgagc
aaggccctggcggcgctcaatgtgccgctgctggtacgccactgccaagactggagcgag
gcgccggtgcaggtcgccgaggtctgccatgaacacgacatcagcgccgtgcacgtcaac
gaggagtacggcgtcaacgaaagcctgcgcgatcagcaggtttgcgcctacctcggccag
caggctatcgcctggcacagccacctcgatcagctgttcttcaagcctggcagcgtactg
acccgctccggcggctacttccaggtctacagccagttccgcaaggtgtgctacgagcgc
ctgcacacggccctgccggcattgatcaccccaccgaaggcgcaaacgccgctggccatc
ggcagtgaggcgatacccgaaaccgtagagggtttcgccacacccagcgccagcctgcgc
ctgctctggcccgccggagaggaggcggccctgcagcgcctgcagcgctttagcgacgag
cagatcacctactacaaggacgaacgcgactttccggccaagcctggcaccagccagttg
tcagcctacctggccgccggcgtagtatcgccgcgccagtgcctgcatgccgcgctcgcg
tccaatcggggcgagttcgacagtggcaacccaggcgtcgtcacctggatcaacgagctg
ctctggcgtgagttctacaagcacacactggtcggctacccacgggtatcgcgccaccgt
gccttccgcctggaaaccgaggcggtgccatggcgccacgcccccgaagacctggccgcc
tggcaagagggccgcaccggcctgccgatcatcgatgcggccatgcgccaactgctggaa
accggctggatgcacaaccgcctgcgcatgatcgtcgccatgttcctgaccaagaacctg
ctgatcgactggcgcgagggcgagcgcttcttcatgcgtcacctgatcgatggcgacctg
gcggcgaacaacggcggctggcagtggagcgcctccaccggcaccgatgcagcgccgtac
ttccgtattttcaacccaatcagccagtcgcagaagttcgatcccgaaggccagttcatt
cgccagtgggtgccagagctggccgggctgaacaagcgcgacattcatgacccatccgca
ctgggcggcctgttcgcgcccgccggttacccacgcccgatcgtcgatctgtcacgctcg
cgcgaacgcgcgctggcggcgttcaagaacctgtctgcgcgggaggttccggcatga
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