Ectopseudomonas chengduensis: QYM18_13425
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Entry
QYM18_13425 CDS
T09586
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pche
Ectopseudomonas chengduensis
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pche03000
]
QYM18_13425
Transcription factors [BR:
pche03000
]
Prokaryotic type
Helix-turn-helix
LysR family
QYM18_13425
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
PBP_like
HTH_24
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WKC35477
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Position
2888565..2889446
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AA seq
293 aa
AA seq
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MTVKQLRAFLAVAQSLSFAQACERLHLSQPALSLAIKNLEQSLGGQLLVRTTRSVALTPE
GETLLPIAVRLLADWDNAEDLLHQHFTLQMGKVAVAAMPSFAGNRLPAALRAFRDAYPRV
NVTVHDVINEQVMEMVRDGRVELGIAFEPATLDGLQFTPLYEDRFVAVVPVASKLAEQSA
LTWAQLLEQPFITLQRPSAVRLLLEDSVISSHGKLPVAFESHQLVTVGRMVAEGLGVSAV
PQLCRQQMEELGARCLPLSEPQVSRRVGLLHQAGHQLSSAAQALSETLLRQEQ
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaagcagctacgcgcctttctcgccgtggcgcaaagcctgagcttcgcccag
gcctgcgaacgcctgcatctgtcgcagccggcgctgagcctggcgatcaagaatctggag
caatcgctcggtggccagttgctggtgcgcaccacccgcagcgtggcgctgacgccggag
ggcgagacactgttaccgattgccgtgcgcctgctcgccgactgggacaacgccgaggat
ttgttgcaccagcacttcaccctgcagatgggcaaggtggcggtggcggccatgccatcg
ttcgccggtaaccgtctgccggcagcgctgcgcgcgtttcgcgacgcctacccacgggtc
aatgtgacggtgcatgacgtgatcaacgaacaggtgatggagatggtgcgcgacggtcgc
gtcgagctgggcatcgccttcgagccggcaaccctcgatggcttgcagttcaccccgctg
tacgaggaccgtttcgtcgccgtggtgccggtcgccagcaagttggccgagcagtccgct
ctgacctgggcacagctgctggagcagcccttcatcaccctgcaacggccttcggcggtg
cgcctgctgctggaagacagcgtgatctccagccacggcaagctgccggtggcgttcgag
agtcatcagttggtgacggtcgggcgcatggtcgccgaaggcctcggcgtcagcgccgtg
ccgcaactgtgccggcagcagatggaagaactgggcgcccgctgcctaccgctgagcgag
ccacaggtgtcgcgtcgcgtcggcctgctgcaccaggctgggcatcagctatccagcgcg
gcgcaggcgttgagtgagaccttgttgagacaggagcagtga
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