Ectopseudomonas chengduensis: QYM18_13490
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Entry
QYM18_13490 CDS
T09586
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pche
Ectopseudomonas chengduensis
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pche03009
]
QYM18_13490
Ribosome biogenesis [BR:
pche03009
]
Prokaryotic type
ribosomal protein modification factors
QYM18_13490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Sin3a_C
Motif
Other DBs
NCBI-ProteinID:
WKC35490
LinkDB
All DBs
Position
complement(2907401..2909599)
Genome browser
AA seq
732 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRDIPTENIRLSQNNIVDPENRYAQIFKIQVELPADISEKDRLGILRSIDRCTVKKVVQQ
GPEFIIEEVDNLDADAQALLMPVSDTTTYIPGKDLPLEQTIANMSGILAELGMKIEIASW
RNIVPNVWSLHIRDAQSNLCFTNGKGSTKESALASALGEFIERLNCNFFYNDQFWGEDIA
AAEFVHYPNERWFKPGPKDALPEEILDEHCLAIYNPDGELRGSHLYDTNSGNTLRGICSL
PFVRRSDGETVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGELCL
PDVPQDVLAKYPGIVAGIKGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFGA
HPSLEVALERSLTELLQGRSFEGLNDLPQPTFDSLALTEPNNFVEHFIDSSGVVSWRFFG
ATPDFEFVEWDFSGEGSDSNEQEAATLFGILEDMGKEVYVATYDDLGANACRILVPGYSE
IYPVEDLIWDNTNKALLFRKDILNLHSLSDRELKSLLRNLNNTEVDDYTDITTLIGIEFD
DNTVWGQLTILELKLLINLALKKYDDAKELVEAFLQYNDNTVERGLFYQAVNAVLEIQLD
DELELANYEHNLRRMFGNERMDAVIGSVDGSVRFHGLTPTSMKLEGLDKHLRLIDSYKKL
HAARARAAGLAG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaaccttcgcctcgaagccaagttcgatgacttc
acggtgattgccgatcagccgattcgctacaagggcgatggctcggcgccggggccgttc
gactatttcctggcctcctcggcgctgtgcgcggcgtacttcgtcaagctgtactgccag
acgcgcgacattcccaccgagaacattcgcctgtcgcagaacaacatcgtcgacccggag
aaccgctacgcgcagatcttcaagatccaggtcgagctgccggcggacatttccgagaag
gatcgcttaggcatcctgcgctccatcgaccgctgcaccgtgaagaaggtggtgcagcag
ggccccgaattcatcatcgaggaagtcgacaacctcgacgccgatgcccaggcgctgctg
atgccggtgagtgacaccaccacctacatcccgggcaaggatctgccgctggagcagacc
atcgccaacatgtcgggcatcctcgccgagctggggatgaagatcgagatcgcctcctgg
cgcaacatcgtgcccaacgtctggtcgctgcacattcgcgacgcgcagtcgaacctgtgc
ttcaccaacggcaaaggatcgaccaaggaaagcgcactggcctcggcgctgggcgagttc
atcgagcggctgaactgcaatttcttctacaacgaccagttctggggcgaggacatcgcc
gccgccgagttcgtccactaccccaacgagcgctggttcaagccgggcccgaaggatgcg
ctgcccgaggaaatcctcgacgagcattgcctggctatctacaacccggatggcgaactg
cgcggctcgcacctgtatgacaccaactcgggcaacaccctgcgcggcatctgttcgctg
ccattcgtgcgcaggagcgacggcgagacggtgtacttcccgtccaacctgatcgagaac
ctgtatctgtccaacggcatgagcgccggcaacaccctggccgaagcccaggtgcagtgc
ctgtcggagatattcgagcgggcggtgaaacgcgagatcctcgaaggcgagctgtgcctg
ccggacgtgccgcaggacgtgctggccaagtacccgggcatcgtcgccggcattaagggc
ttggaggaacaaggcttcccggtgctggtgaaggatgcttccctcggcggtgaattcccg
gtgatgtgcgtaaccctgatgaacccgcgcaccggcggcgtattcgcctcattcggcgcc
cacccgagcctggaagtggcgctggagcgcagcctcaccgaactgctgcaaggccgcagc
ttcgaaggcctcaacgacctgccgcagccgaccttcgacagcctggcgctgaccgagccg
aacaacttcgtcgagcacttcatcgactccagcggcgtggtgtcctggcgcttcttcggc
gccacgccggacttcgaattcgtcgaatgggatttctccggcgaaggcagcgactcgaat
gagcaggaagccgcgaccctgttcggcatcctcgaggacatgggcaaggaggtttacgtg
gccacctatgacgatctcggcgccaacgcctgccgcatcctggtgccgggctactcggaa
atctatccggtcgaggatctgatctgggacaacaccaacaaggcgctgctgttccgcaag
gacatcctcaacctgcacagcctgagcgaccgcgaactgaagtcgctgctgcgcaacctc
aacaacaccgaggtcgacgactacaccgacatcaccacgctgatcggcatcgagttcgac
gacaacacggtgtggggccagctgaccatcctcgagctgaagctgctgatcaacctggcg
ctgaagaaatacgacgatgccaaggagctggtcgaggccttcctgcagtacaacgacaac
accgtcgagcgcggcctgttctaccaggcggtcaacgccgtgctggagatccagctggac
gacgagctggagctggccaactacgagcacaacctgcgccgtatgttcggcaacgagcgc
atggatgcagtgatcggctcggtggacggcagcgtgcgtttccatggcctgacgccgacc
agcatgaaactcgaaggtctggacaagcacctgcgcctgatcgacagctacaagaagctg
cacgctgcgcgcgccagggcggcgggcctggccggctaa
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