Ectopseudomonas chengduensis: QYM18_15150
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Entry
QYM18_15150 CDS
T09586
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pche
Ectopseudomonas chengduensis
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pche03021
]
QYM18_15150 (rapA)
Transcription machinery [BR:
pche03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
QYM18_15150 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
PRKG1_interact
Motif
Other DBs
NCBI-ProteinID:
WKC35803
LinkDB
All DBs
Position
complement(3241669..3244512)
Genome browser
AA seq
947 aa
AA seq
DB search
MAQYQPGQRWISDSEAELGLGTILAEDGRLLTVLYPATGETRQYATRNAPLTRVRFAPGD
EITHFEGWKLTVQEVEDVDGLLVYHGLDAQHKPVTMPETQLSNFIQFRLASDRLFAGQID
PLAWFALRYHSLEHNSRLLQSSLWGLGGARAQPIAHQLHIAREVADRIAPRVLLADEVGL
GKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLDVALFDAERFMESDAS
NPFEDCQLALVALEWLKDDEKAQDALFAAGWDLLVVDEAHHLVWHPEQASAEYSLVEQLA
EVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLQAFRAESSQYRPVAEAVQELLDQG
KLSAQARDAIGGFLGDEGRELLDAIDGGDEEARARLVRELLDRHGTGRLLFRNTRAAVQG
FPERELHPYPLPSPDEYLELPLGEHAELYPEVSYQAQDDIDEEQRWWRIDPRVEWLIDTL
KMLKKFKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFGAQ
VLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQKHRIQLHVPYLENSPQ
ERLFQWYHQALNAFLATCPTGNALQHQFGPRLLPLLENGDDGQWQQLVDEATAERIRLEG
ELHSGRDRLLELNSGGAGEGEALVEAILEQDDQFTLPIYMEELFNAFGIDSEDHSDNALI
LRPSEKMLDASFPLGDDEAVTITYDREQALAREDMQFLTWEHPMVQGGMDLVLSGSMGNT
AVALIKNKALKPGTVLLELLYVSEVVGPRKLQLGRFLPPAALRCLFDANGNDLAAKVGFE
TLNDQLESVPRASANKFVQAQRDVLAKQINDAEAKVMPRHVERVSEAKRRLIAELDEELA
RLVALRAVNPSVRDSEIDALREQREQSLAMFDKAALRLEAIRVLVAG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatatcaaccggggcaacgctggatcagtgacagcgaagcggaattgggtctg
ggaaccatcctcgccgaggacggccgcctgctcaccgtgctctacccggccaccggcgaa
acccgccagtacgctacgcgcaatgccccgttgacccgtgtacgcttcgccccgggtgac
gagatcacccatttcgagggttggaagctcaccgtgcaggaagtcgaggacgtcgacggc
ctgctggtctaccacggcctcgatgcccagcataaaccggtcaccatgccggaaactcag
ctgtcgaacttcatccagttccgcctggccagcgaccgcctgttcgccggccagatcgac
ccgctggcctggttcgccctgcgttaccacagcctcgaacacaacagccgcctgctgcag
tcgtccctctggggcctcggcggtgcacgcgcgcaaccgatcgctcaccagttgcacatc
gcccgtgaagtggctgaccgcatcgccccgcgcgtactgctggccgacgaagtgggcctg
ggcaagaccatcgaagccggcctggtgattcatcgccagctgctctccggtcgcgccagc
cgcgtgctgatcctggtgccggaaaacctgcagcaccagtggctggtggaaatgcgccgc
cgcttcaacctcgacgtcgccctgttcgacgccgagcgtttcatggaaagcgacgccagc
aaccccttcgaggattgccagctggcgctggtcgccctggagtggctgaaggacgacgaa
aaggcccaggacgcgctgttcgccgccggctgggacctgctggtggtcgacgaagcccac
cacctggtctggcacccggagcaggccagcgccgaatactcgctggtcgagcaactggca
gaggtcatccccggcgtgctgctgctcaccgccaccccggaacagctcggccaggacagc
cacttcgcccgtctgcgcctgctcgaccccaatcgcttccatgatctgcaagccttccgc
gccgaaagcagccagtaccgcccggtggccgaagcggtgcaggagctgctcgaccagggc
aagctcagcgcccaggcgcgcgacgccattggcggcttcctcggtgatgaaggtcgcgaa
ctgctcgacgccattgacggcggcgacgaagaagcacgcgcccgtctggtacgcgagctg
ctggatcgccacggcaccggtcgcctgctgtttcgtaacacccgtgctgccgtacagggc
ttccctgagcgcgagctgcacccctacccgctaccgagccccgatgaatatctggaactg
ccgctgggcgagcatgccgagctgtacccggaagtcagctaccaggcgcaggacgatatc
gacgaagagcagcgctggtggcgcatcgacccgcgcgtcgaatggctgatcgacaccctg
aagatgctcaagaaattcaaggtgctggtgatctgcgcccacgccgagaccgcgctggat
ctggaagacgccctgcgcgtgcgctccggcatccccgccacggtgttccatgaaggcatg
agcatcctcgaacgcgaccgcgccgccgcctacttcgccgacgaagaattcggcgcacag
gtgctgatctgctcggaaataggctccgaaggccgcaacttccagttcgcccatcacctg
gtgctgttcgacctgccggctcacccggacctgctcgaacagcgcattggccgtctcgac
cgtatcggccagaaacaccgcatccagctgcacgtaccttacctggagaacagcccgcag
gagcgtctgttccagtggtaccaccaggcgctgaatgccttcctcgccacctgccccacc
ggcaacgccctgcagcaccagttcggcccacgcctgctgccgctgctggaaaacggcgac
gatggccagtggcagcaactggtggatgaagccaccgccgagcgcatccgcctcgaaggc
gaactgcacagcggtcgcgaccgcctgctggagctgaactccggcggtgccggtgaaggc
gaggcgctggtggaagccatcctcgagcaggacgaccagttcaccctgccgatctacatg
gaagagctgttcaacgccttcggcatcgacagcgaagaccactccgacaacgccctgatc
ctgcgccccagcgagaagatgctcgatgccagcttccccctgggtgacgacgaggcggtg
accatcacctacgaccgcgagcaggccctggcccgcgaggacatgcagttcctcacctgg
gaacaccccatggtgcagggcggcatggacctggtgctgtccggctcgatgggcaacacc
gccgtcgcactgatcaagaacaaggcgctcaagcccggcaccgtgctgctggagctgctc
tacgtcagcgaagtggtcggcccgcgcaaactgcaactggggcgcttcctgccaccggcg
gcgctgcgttgcctgttcgacgccaacggcaacgacctggccgccaaggtcggcttcgaa
accctcaatgaccagctggaaagcgtgccgcgggccagcgccaacaagttcgtccaggcc
cagcgcgacgtgctggccaagcagatcaacgacgccgaagccaaggtcatgccgcgccat
gtcgagcgcgtgagtgaggccaagcgtcgcctgatcgccgaactggacgaggaactggcg
cgcctggtcgccctgcgcgcggtcaacccgagcgtacgtgacagcgagatcgacgccctg
cgcgagcagcgcgaacagagcctggcgatgttcgacaaggccgccctgcgcctggaagcg
attcgcgtattggtggcaggctaa
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