Ectopseudomonas chengduensis: QYM18_15690
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Entry
QYM18_15690 CDS
T09586
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pche
Ectopseudomonas chengduensis
Pathway
pche00071
Fatty acid degradation
pche00280
Valine, leucine and isoleucine degradation
pche00310
Lysine degradation
pche00362
Benzoate degradation
pche00380
Tryptophan metabolism
pche00410
beta-Alanine metabolism
pche00640
Propanoate metabolism
pche00650
Butanoate metabolism
pche00907
Pinene, camphor and geraniol degradation
pche00930
Caprolactam degradation
pche01100
Metabolic pathways
pche01110
Biosynthesis of secondary metabolites
pche01120
Microbial metabolism in diverse environments
pche01200
Carbon metabolism
pche01212
Fatty acid metabolism
Module
pche_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QYM18_15690 (fadB)
00650 Butanoate metabolism
QYM18_15690 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
QYM18_15690 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QYM18_15690 (fadB)
00310 Lysine degradation
QYM18_15690 (fadB)
00380 Tryptophan metabolism
QYM18_15690 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QYM18_15690 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QYM18_15690 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QYM18_15690 (fadB)
00930 Caprolactam degradation
QYM18_15690 (fadB)
Enzymes [BR:
pche01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QYM18_15690 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QYM18_15690 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QYM18_15690 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
QYM18_15690 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WKC35910
LinkDB
All DBs
Position
3351963..3354110
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRASVDAIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLAVPTVVAINGIALGGGFE
MCLAADYRVMSASAKIGLPEVKLGIYPGFGGTVRLPRVIGTDNAVEWIASGKENRAEDAL
KVGAVDAVVSADKLQAAALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMCFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEATGFVKLAKTSVAESLIGLFLNDQEL
KKKAKHHDEIARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLNEASKL
LGKRVEKGRMAPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEDAVR
EDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYDANRLGQKNGKGFYAYETDKRGKP
KKVTDPAAYELLKSIVVEEREVTDEDIINFMMIPLCMETVRCLEDGIVDTAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYAELGALYHPTAKLREMAAKGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aagttcgacctcaagggtgagtccgtcaacaaattcaaccgtcttaccctcaacgagctg
cgcgcctccgtcgacgcgatcaaggctgacggttcgatcaagggcgtgattgtcaccagt
ggcaaggacgtgttcatcgtcggcgccgatatcaccgagttcgtcgacaacttcaagctg
cccgacgcagagctggtggctggcaacctggaagccaacaagatcttcagtgatttcgaa
gacctcgccgtgccgaccgtcgtcgccatcaacggcatcgccctgggtggcggtttcgag
atgtgcctggctgctgactatcgcgtaatgagcgccagtgccaagatcggcctgccggaa
gtcaaactgggcatctacccgggcttcggcggcaccgtgcgcctgccgcgcgtgatcggt
accgataacgccgtggagtggatcgcttcgggcaaggaaaaccgtgccgaagacgccctg
aaagtgggcgccgtcgatgccgtggtcagtgcagacaagctgcaggccgccgctctcgat
ctggtcaagcgcgccatctccggcgagctggactacaaggccaagcgtcagcccaagctg
gaaaagctcaagctcaacgccatcgagcagatgatgtgcttcgagaccgccaagggcttc
gtcgctggccaggccggcccgaactacccggctccggtcgaagccatcaagaccattcag
aaagccgccaacttcggtcgtgacaaggcgctggaagtcgaggccaccggcttcgtcaag
ctggccaagacctcggttgccgagagcctgatcggtctgttcctcaacgatcaggaattg
aagaagaaagccaagcaccacgacgagatcgctcgcgacgtgaaactggccgccgtactc
ggcgccggcatcatgggtggcggcatcgcctatcagtcggcctccaagggcaccccgatc
ctgatgaaggatatccgtgaagagggtatccagatgggcttgaacgaggcttccaagctg
ctcggcaagcgcgtcgagaaaggccgcatggccccggcgaagatggccgaagccctcaac
gccatccgtccgaccatgtcctacggcgatttcggcaacgtcgacatcgtcgtcgaagcc
gtggtcgagaaccccaaggtcaagcagatcgtgctggccgaggtggaagatgcggtgcgt
gaagacgctatcctggcctccaacacctcgaccatctccatctccctgctggcccaggcg
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcatccgtggcgagaagtccagcgaagtggccgtggccaccaccgttgcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgattgccccggcttcctggtc
aaccgcgtactgttcccgtacttcggcggcttctccaagctgctgggcttcggcgtcgac
ttcgtgcgcatcgacaaggtgatggagaagttcggctggcccatgggcccggcttacctc
tccgacgtggtcggcatcgacactggccaccacggccgtgacgtgatggccgaaggcttc
ccggaccgtatggctgtcgaaggcaagactgccgtcgacgtgatgtacgacgccaatcgc
ctgggtcagaagaacggcaagggcttctatgcctacgagaccgacaagcgcggcaagccg
aagaaggtcaccgacccggctgcttacgagctgctcaagtccatcgtagtcgaagagcgt
gaagtcaccgacgaggacatcatcaacttcatgatgatcccgctgtgcatggaaaccgtt
cgttgcctggaagacggcattgtcgacaccgcagccgaggccgacatgggcctgatctac
ggtatcggcttccctcccttccgtggcggtgcgctgcgctacatcgattccatcggtgtt
gctgaattcgtcgccctggctgacaagtatgccgagctgggcgccctgtaccacccgacc
gcaaaacttcgcgaaatggccgccaagggccagaagttcttcggttaa
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