Ectopseudomonas chengduensis: QYM18_17090
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Entry
QYM18_17090 CDS
T09586
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pche
Ectopseudomonas chengduensis
Pathway
pche03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QYM18_17090 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pche03019
]
QYM18_17090 (recQ)
03400 DNA repair and recombination proteins [BR:
pche03400
]
QYM18_17090 (recQ)
Enzymes [BR:
pche01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QYM18_17090 (recQ)
Messenger RNA biogenesis [BR:
pche03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QYM18_17090 (recQ)
DNA repair and recombination proteins [BR:
pche03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QYM18_17090 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
Sigma70_r4_2
ResIII
HTH_23
GerE
HTH_29
Transposase_mut
Motif
Other DBs
NCBI-ProteinID:
WKC36173
LinkDB
All DBs
Position
3661098..3663230
Genome browser
AA seq
710 aa
AA seq
DB search
MLDHAMRILKDVFGYDAFRGNQAAIIERVAGGGDALVLMPTGGGKSLCFQVPALMREGLA
VVVSPLIALMDDQVATLDELGVAAVALNSTLSPDEQREIADRIRRGQIKMLYLAPERLVQ
PRMLSFLQGLDIALFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADKRT
REEIVQRLHLDNAERFLSSFDRPNIFYRIQPKDQPRKQLLGFLAARKGDAGIVYCLSRKK
VEEVAEFLSSQGFPALPYHAGLPNELRAFNQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
CHMDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSDGDERHKRIEQHK
LDAMLALCEETRCRRQALLAYFDEELPNPCGHCDNCIDGVETWDATEPARQALSAVYRSG
QRYGVGHLVDILLGRDNEKIRAAGHKHLAVFGVGKGFSEVEWRTLFRQLVARGLADVDLD
GFGGLRLSETCRPLLRGEVSLQLRREPKPAQAAKASSSAASQLVRGHEREMWEALRSLRR
KLAEEHSVPPYVIFPDATLLEMLRSQPSSLSDMAEVSGVGARKLERYGQAFLEVLNGSGA
DDTPAPVADLRHELVSLARAGMTPAQIAGQLNCSEKNVYSLLAEAIAQQQLTLEQALDLP
EELLGEIQETFLDGEGELPAVSEVAPLFAGRVDESVLYCVRAALQAEFEI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccacgccatgcgcattctcaaagacgttttcggctacgacgcctttcgcggc
aaccaggccgcgatcatcgagcgcgtggccggcggcggcgatgccctggtgttgatgcct
accggcggcggcaagtcgctgtgcttccaggtgccggcgctgatgcgcgagggcctggca
gtggtagtttctccgttgatcgccctgatggacgatcaggtggccaccctcgacgagttg
ggtgtggcagccgtggcgctgaactccaccttgagccctgacgagcagcgcgagattgcc
gaccgtatccgtcgcgggcagatcaagatgctctacctggcgcccgagcgcctggtgcag
ccgcgcatgctgagcttcctgcagggcctggatatcgccctgttcgccatcgacgaagcg
cattgcgtgtcgcagtggggccatgatttccgacctgagtacctgcagctcggtcagctg
gctgagctctttccacatgtgccgcgcatcgccctgaccgccaccgcggataaacgtacc
cgtgaggaaatcgtccagcgtctgcacctggacaacgccgagcgctttctgtcgagcttc
gatcggccgaacatcttctatcgcatccagcccaaggatcagccgcgcaagcagctgctt
ggttttctcgccgcgcgcaagggtgatgccggtatcgtttactgcctgtcgcgcaagaaa
gtcgaggaggtcgccgagtttctcagcagccagggcttcccggccctgccttatcacgcc
ggcttgcccaacgagttgcgtgccttcaatcagaagcgctttctcaacgaggaaggcctg
atcatggtggcgaccatcgccttcggcatgggcatcgacaagcccaacgtgcgcttcgtc
tgccacatggatctgcccaagtcgctggaggcctactaccaggagaccggtcgcgccggt
cgtgacggtctgccggccgatgcctggatggcttacggcctgcaggacgtgatcttcctc
aagcagatgctcaacaattccgacggtgatgagcgccacaagcgcatcgagcagcacaag
ctcgacgccatgctcgccctgtgcgaggagacacgctgccgccgtcaggcgctgctggct
tacttcgatgaagaattgcccaacccttgcgggcactgcgacaactgcatcgatggcgtc
gagacctgggatgccaccgagccggcgcgccaggcgttgtcggctgtctatcgcagcggc
cagcgctatggcgtcggccatctggtggatattctgctcggccgagacaacgagaagatt
cgcgccgccggtcataagcacctggcggtgttcggcgtcggcaagggcttttccgaggtc
gagtggcgaaccctgtttcgccagttggtcgcccgcggtctggccgatgtcgatctggat
ggcttcggcggtctgcgtctgagcgagacctgcaggccgctgctgcgcggtgaggtcagc
ctgcaactgcgccgtgagcccaagccggcgcaggcggccaaggcctccagcagcgccgcc
agccaactggtgcgtggccatgagcgggaaatgtgggaggcgctgcgcagtctgcgtcgc
aagctggccgaggaacacagcgtaccgccgtacgtgatcttccccgatgccacgctgctg
gaaatgttgcgcagccagcccagctcgctgagcgatatggccgaggtcagtggcgtcggc
gcgcgcaagctggagcgctatggccaggccttcctggaagtgctcaatggcagcggcgcg
gatgacacgccggctccggtggccgacctacgtcacgagctggtcagcctggcccgcgcc
ggcatgacgcccgcacagatcgccggtcagcttaactgcagcgagaagaacgtttacagc
ctgctggccgaggccatcgcccagcaacaactgacgctggagcaggcgctggatcttcct
gaggaactgctgggcgagattcaggagaccttcctcgacggcgagggcgagctgccggcc
gtgagtgaggtcgcgccactgttcgccggtcgcgtcgacgagagcgtgctctattgcgtg
cgtgcggcgctgcaggccgagttcgagatctaa
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