Ectopseudomonas chengduensis: QYM18_21645
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Entry
QYM18_21645 CDS
T09586
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pche
Ectopseudomonas chengduensis
Pathway
pche03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QYM18_21645 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pche03400
]
QYM18_21645 (recC)
Enzymes [BR:
pche01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QYM18_21645 (recC)
DNA repair and recombination proteins [BR:
pche03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QYM18_21645 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WKC37027
LinkDB
All DBs
Position
complement(4641070..4644483)
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AA seq
1137 aa
AA seq
DB search
MPASPELSPGLIVIHGNHLEELRALAVQWMRRYPLRPLENEVLLVQSNGIAQWLKLALAE
RDGCGIAAALDVDLPARFLWQAYRNVLGRDAIPQQSPLDKAPLTWRLMRLLPGLLAEEAF
APLRRFLADDQDLRKRHQLAERLADLFDQYQVYRADWLTDWAAGQDRLRTSRGGERPLEG
DSRWQPALWRALLADVGAQHLAESRAGVHPRFVARMGEMDAAPPGLPRRITVFGISSLPA
QVLEALAAMARFSQVMLYVHNPCQHHWGDIVEDKDLLRHEYRRQQRKGKPSAQIGLFEQE
DMHQHGQPLLAAWGKQGRDYINLLDQYDEPQRYREQFERIDLFSPASESCLLGQLQNDIL
DLRPLAETRSTWPPVDPERDHSLRFHIAHSAQREVEILHDQLLASFSEDATLRPRDVIVM
VPDVNAYAPHIQAVFGQFASDDPRFIPFTLADQGLRGKEPMVIALEHLLRLPDSRFSVSE
ILDLLDVAALRQRFAITEDQLPTLRRWLEGAGVRWGLDSSQRQALGLGENLEQNTWRFGL
RRMLLGYAVGTGDAFAGIEPYDEIGGLDAALIGPVTRLLESLDRHLQQLREPATPVQWGE
RLRSLLDDFFQPQSDREEVLTTQLLDALDAWLALCEAATLDEALTLPVVREAWLDGLDQG
RLSQRFLAGAVNFCTLMPMRAIPFRQVCLLGMNDGDYPRSQAPLDFDLMAGDYRPGDRSR
REDDRYLLLEALLAARDRLYISWVGRSIRDNSERPPSVLVGQLRDHLASAWTPAGGGDLL
HGLTTEHPLQPFSRRYFDGETQLFSYAREWAALHGQALAGESVASLPAWEEGQQLTPELL
QSFLRDPVKCFFTRRLKVFLDEEEQAQLDSEPFALDGLQRYQLQEILLKAAVAGEGDSDD
ALRSAADRMQRSGVLPLAGFGEQYRNALLEPLPAQVQRYQGLCLCWPTLLESPQRLTFVA
AGVQLDGWLAGLRQKADGGLARLELLPGALYKDKSWKWHRLMRPYVLHVIAAACGVPLTT
LLVGEDRSLAFEPLPTEHAASVLTTWLEAWNAGMQTPLPVALKTSLAWLQDNNEDKARSV
YEGGYNLSGEVKGSASLARQFPDYAALTADGQFPAWSERLYQPLLDSHPQALEEDAA
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccagcccggagttgtcccccggccttatcgtcattcacggcaatcaccttgaa
gagctgcgtgcgctggcggtgcagtggatgcggcgctatccgctgcggccgctggagaac
gaagtgctgctggtgcagagcaacggcatcgcccagtggctcaagctggcgcttgccgag
cgtgacggctgtggcatcgcggcggcgctggacgttgacctgccggcacgctttctctgg
caggcgtaccgcaacgtgctgggcagggacgcgattccgcagcagtcgcccctggacaag
gcaccgctgacctggcgtctgatgcgcctgttgccgggcctgctggccgaggaggcgttt
gcgcccttgcgccgctttctcgccgatgaccaggatctgcgcaagcgccaccagttggcc
gagcgcctggccgatctgttcgaccagtaccaggtctaccgcgccgactggctgacggac
tgggcggcggggcaggatcgcctgcgcacctcgcgcggtggtgagcggccactggagggc
gactcccgttggcaacccgcgctgtggcgcgccttgctggcagatgttggcgcgcagcac
ctggccgaaagtcgcgccggcgtgcatccgcgtttcgtcgctcgaatgggcgagatggat
gcagcgccgcccggactgccgcggcgcatcaccgttttcggaatctcttcgttgccggcc
caggtgctggaggcgctggcggccatggcgcgcttcagccaggtcatgctttacgtacac
aacccctgtcagcaccactggggcgatatcgtcgaagacaaggatctgctgcgccacgaa
taccgccgtcagcagcgcaagggcaaaccaagcgcgcagatcggtctgttcgagcaggag
gacatgcaccagcacgggcagccgctgctcgctgcctggggcaagcaggggcgtgactac
atcaacctgctggatcagtacgacgagccgcagcgttaccgcgagcagttcgaacgcatc
gacctgttcagcccggccagtgagagctgcctgctcggccagttgcagaacgacatcctc
gacctgcgtccgctggcggaaacgcgtagcacctggccgccggtcgacccggaacgtgat
cattcgttgcgttttcatatcgcccacagtgctcagcgcgaagtggaaattctccacgat
cagctgctggccagtttcagcgaggacgccacgctgcggccgcgcgacgtgatcgtcatg
gtaccggacgtcaatgcctacgcaccgcatatccaggcagtgttcggccagttcgccagt
gacgacccgcgtttcattcccttcaccctggctgatcagggactgcgcggcaaggagccg
atggtcatcgcgctggaacacttgttgcgcctgccggacagccgcttcagcgtcagtgag
atactcgacctgctggatgtcgccgcgttgcgtcagcgcttcgccatcaccgaggatcaa
ttgcccaccctgcgccgctggctggagggtgccggtgtgcgctgggggctggattcgagc
cagcgacaagcgctgggtctgggcgagaacctggagcagaacacctggcgcttcggcctg
cggcgcatgctgctgggctacgcagtgggtacgggcgacgccttcgccggcatcgagccg
tacgacgagatcggcgggctcgatgctgcgctgatcggcccggtgacgcgcctgctggaa
agcctcgaccggcatctacagcagctgcgcgagccggccacgccggtgcagtggggcgag
cgcctgcgcagtttgctcgacgacttctttcagcctcagagcgaccgtgaagaggtactg
acgacccaactgctcgatgcgctggatgcctggctggcgctctgcgaggccgcgacgctg
gacgaagcgttgactctaccggtggtgcgtgaggcctggctggacgggctcgaccaggga
cggctgagccagcgttttctcgccggtgcggtgaacttctgcaccctgatgccgatgcgc
gcaattccgttccgtcaggtctgcctgctgggcatgaacgatggggactatccgcgcagc
caggcgccgctggatttcgacctgatggccggtgattaccgccccggtgaccgttcgcgt
cgtgaggatgaccgctatctgctgctggaagccttgttggcagcgcgtgatcgtctctac
atcagctgggtagggcgcagcatccgcgacaacagcgaacggccgccgtccgtgctggtc
ggccaactgcgcgaccatcttgccagcgcctggacaccggctggtggcggcgacctgctg
cacggcctgaccaccgagcatcccttgcaaccgtttagccggcgctacttcgatggagag
acgcagctgttcagttatgcccgcgagtgggcagccctgcatggccaggctttggcgggc
gagagcgttgcctccctgccagcctgggaagaggggcagcagctcactcccgaactgttg
cagtcgttcctgcgtgatccggtgaagtgtttcttcactcgccgcctcaaggtgtttctc
gatgaagaagagcaggcgcagctcgacagcgagccattcgccctcgacggactgcagcgt
taccagttgcaggagatcttgctcaaggcggcggtagcaggcgagggcgacagcgacgat
gcgctgaggtcggcagccgaccgtatgcagcgtagcggcgtgctgccgctggccggtttc
ggcgagcagtaccgcaacgccctactggagccgctgccggcgcaggtgcagcgctaccag
gggctttgcctgtgctggccaaccctgctggagtcaccgcagcgcctgactttcgtcgcc
gctggtgtgcagctcgacggctggcttgccgggctgcggcagaaagccgatggcggcctg
gcgcgtctggagctgctgccgggggcgttgtacaaggataagagctggaagtggcatcgc
cttatgcgcccctacgtgctgcacgtcatcgccgcggcctgcggcgtgccgctgaccacg
ctgctggtcggcgaggatcgcagcctggccttcgaacccctacctacggagcacgcagcc
agcgtactgaccacttggctggaagcctggaacgctggcatgcagacgcctctgccggtc
gccctgaaaacctcgctggcctggttgcaggacaacaacgaggacaaggctcgcagcgtc
tacgagggaggctacaacctctccggtgaagtcaagggtagcgccagcctggcgaggcag
ttcccggactatgccgcactcaccgccgatggccagtttccggcatggagcgaacggctc
taccagccgctgctcgacagccatccgcaagcgctcgaggaggacgcagcatga
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