Paenibacillus chitinolyticus: PC41400_02835
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Entry
PC41400_02835 CDS
T06610
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pchi
Paenibacillus chitinolyticus
Pathway
pchi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PC41400_02835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchi03400
]
PC41400_02835
DNA repair and recombination proteins [BR:
pchi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PC41400_02835
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PC41400_02835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UvrD-helicase
AAA_22
AAA_30
AAA
AAA_5
AAA_16
DUF87
RASSF8-10_RA
AAA_7
UB2H
DUF8810
HerA_C
Phage_Mu_Gp48
nSTAND_NTPase5
Thg1C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QAV16688
UniProt:
A0A410WQI1
LinkDB
All DBs
Position
619170..621167
Genome browser
AA seq
665 aa
AA seq
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MNEIIKSTNKFELVSDFSPQGDQPSAIQELVKSIQNGTRHQTLLGATGTGKTFTAAQVIA
QLNRPTLIIAHNKTLAAQLCSEFQEFFPNNAVSYFVSYYDYYQPEAYIASSDTYIEKDSS
INEEIDKLRHSATSSLFERRDVIIIASVSCIYGLGSPAEYGSLLLSLRTGMEKSRNEILH
RLVDIQYQRNDLNFVRGTFRVRGDVIEIFPASRSEQAVRVELFGDEIERITEIDVLTGEI
LGERDHIAIFPASHFVTKEDTMKRALVNIERELEERLEELRGKGKLLEAQRLEQRTRYDI
EMMAEMGFCSGIENYSGPLTFRERGATPYTLLDYFPDDMLVMVDESHVTLPQIRAMYNGD
RARKEVLVEHGFRLPSALDNRPLQFEEFERKVNQIVYISATPGPYELEHTPEMVQQIIRP
TGLLDPIIEVRPTKGQIDDLIGEIQDRIAKDERVLVTTLTKKMSEDLTDYFKEIGIKVRY
LHSDIKTLERMQILRDLRLGTFHVLVGINLLREGLDLPEVSLVAILDADKEGFLRAERSL
IQTIGRAARNAHGRVIMYGDKITDSMDKAIKETERRRTIQEAYNKEHGITPQTIAKKIRD
VIEATKVAEEKTEYLAEVKTGKMSKKDRAAVIERLEAEMKDAAKNLQFERAAELRDALLE
LKAEG
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgaaataatcaagagcacgaataagtttgaactcgtatcggatttttctcctcag
ggagaccagccttccgcgatccaagagctcgtcaaaagcatacagaacgggacgagacac
cagacgcttttgggcgcgacgggtacggggaagacgtttacggcggctcaggtcattgcc
cagctaaaccgtccgaccctcattattgcgcacaataagacgctggcggctcagctttgc
agcgagttccaggagttttttccgaacaacgccgtgtcttatttcgtcagctactacgat
tactatcagccggaggcttatatagcttcttcggatacgtatatagagaaagactccagc
atcaatgaagaaatcgataagctccgccactcggcgacgagttctttgtttgaacgcaga
gacgttattatcatagcgagcgtgtcgtgtatttacggcctcggttcgcctgcggaatac
ggatcgctgctgttgtcgctgcgcaccggaatggagaagtcccgcaacgagattcttcac
cggcttgtggacatccagtatcagcgcaacgatttgaacttcgtgcgcggcacgttccgc
gtccgcggcgatgtcattgagattttcccggcctcccgaagtgaacaggctgtccgtgtg
gaactgttcggggacgagatcgagcggatcaccgaaatcgacgtgcttacgggcgagatt
ctgggtgaacgcgatcatatcgcgattttcccggcgtctcacttcgtaacgaaagaagat
acgatgaagcgtgcgctggtgaacatcgagcgcgagcttgaggagcggctcgaggaactg
cgcggcaagggcaagctgctcgaggcgcagagactggaacagagaacacgctacgacatc
gaaatgatggcggagatgggcttctgttccgggatcgagaactattcgggaccgctgacg
ttccgcgaacgcggggcgacgccttatacgcttctcgattatttcccggacgacatgttg
gtaatggtcgacgagtcccacgtaacgctgccccagatccgggcgatgtacaacggggac
cgggcgcgcaaggaagtgctggtcgagcacggattccgtctgccttccgcgctggataac
cgtcctctgcagttcgaggagttcgaacgcaaagtgaatcagatcgtttacatctcggca
acgccgggtccatacgagctggaacacactccggagatggtccagcagattatccgtcct
accggactgctcgacccgatcattgaagtgagaccgaccaaaggtcagatcgacgacctt
atcggcgagattcaagaccggatcgcgaaggacgagcgggttctcgtgacgaccctcacg
aagaagatgtccgaggatttaacggattacttcaaggaaatcggcattaaggtgcgttat
ctgcattccgatatcaagactttggagaggatgcaaatcctccgcgacctgcggctgggt
accttccacgttcttgtgggaatcaacctgctcagggaggggcttgatttgccggaagtt
tcgctggtggctattctggatgccgacaaagaaggcttcctccgcgcggaacgttcgctg
atccagacgatcggccgggcggcccggaacgcgcatggacgcgtgataatgtacggcgat
aaaattacggattccatggataaggcgattaaggaaaccgaacgccgccgtaccatacag
gaagcctacaacaaagagcacgggattacccctcaaaccattgccaagaagattcgtgac
gttatcgaggcgaccaaggttgccgaagagaagacggaatacttggcagaggtgaagaca
ggcaagatgtccaagaaagatcgcgccgcggtaatcgaacgtctcgaggcggagatgaaa
gatgcggcgaagaatttgcaatttgaaagagctgcggaattgcgcgatgctcttcttgaa
ctgaaagcggaaggttag
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