Paenibacillus chitinolyticus: PC41400_03020
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Entry
PC41400_03020 CDS
T06610
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pchi
Paenibacillus chitinolyticus
Pathway
pchi03030
DNA replication
pchi03430
Mismatch repair
pchi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PC41400_03020 (holB)
03430 Mismatch repair
PC41400_03020 (holB)
03440 Homologous recombination
PC41400_03020 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchi03032
]
PC41400_03020 (holB)
03400 DNA repair and recombination proteins [BR:
pchi03400
]
PC41400_03020 (holB)
Enzymes [BR:
pchi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PC41400_03020 (holB)
DNA replication proteins [BR:
pchi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PC41400_03020 (holB)
DNA repair and recombination proteins [BR:
pchi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PC41400_03020 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_5
TraI_hel_assoc_N
PBP_like
Motif
Other DBs
NCBI-ProteinID:
QAV16719
UniProt:
A0A410WQL3
LinkDB
All DBs
Position
669594..670571
Genome browser
AA seq
325 aa
AA seq
DB search
MSFQTIPGQETAKRILQSGLRQDRISHAYIFSGPVGTGRKQTARMLAKAIYCTNLKDDAC
GECLECRKVEHGNHPDLYQIEPDGASIKIDQIRELQKQFAYRSAGSGTKIYILNQAEKMT
VQAANSLLKFLEEPNSKVVAVLVTENGHALLPTIQSRSQWISFTPMPRAEMARVLLEEGH
PAALVQPAIHLTAGIQAAKEMIQTNGFAEIRSTMIQLLRETLTRYPSSFVTLQQKWIKAG
LADHTALLFDLMILWLKDMVSLRIGRKENFVYIDQMDWMGPLSFKRETGEWVRLLARAVE
LQKRLRFNANPQLVVEKMLVDIQGV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcaaacgatcccaggccaggaaacggccaagcgcatattgcaaagcggcttg
cggcaggatagaatatcgcatgcttatatatttagcggtccggtaggtacggggaggaag
cagacagcccgtatgcttgcgaaagccatctactgcacgaacctcaaggatgacgcctgc
ggggaatgtctggaatgcaggaaggtcgagcatggcaaccatccggatctttaccaaatt
gagcccgatggggcttccatcaagatcgaccagattcgcgagctgcagaagcagtttgcc
taccgctccgcaggttccggcacgaagatttatattctgaatcaagcggagaaaatgact
gtccaggctgccaacagcctgcttaagtttttggaagagccgaactcgaaagtggttgcg
gtactcgttaccgagaatggacatgctctgctgccgactattcagtcgcggtctcaatgg
atttctttcacacctatgcctcgggccgagatggcgagagtactgctggaagaaggccac
cctgctgccctggtgcagcctgccattcatttgacggcgggcatacaagcggccaaagaa
atgattcagacaaatgggtttgccgaaatccgcagcacaatgatacaattgttgagggaa
acgctgacacgctacccgtcttcctttgttacgctgcagcagaagtggatcaaagccggg
ctggccgatcatacggctctgcttttcgatctcatgattttatggttgaaagacatggtt
tccctgcgaatcggtcgcaaggaaaatttcgtatatatcgaccagatggactggatgggg
ccactgtcgtttaagagggagaccggggaatgggtgcgtttgctcgcccgggcggttgaa
cttcaaaaacggctgcgttttaatgccaatccacaactggttgtcgagaaaatgctagtg
gacatacagggggtgtaa
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