Paenibacillus chitinolyticus: PC41400_05615
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Entry
PC41400_05615 CDS
T06610
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pchi
Paenibacillus chitinolyticus
Pathway
pchi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PC41400_05615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchi03400
]
PC41400_05615
Enzymes [BR:
pchi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PC41400_05615
DNA repair and recombination proteins [BR:
pchi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PC41400_05615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
QAV17166
UniProt:
A0A410WRV4
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All DBs
Position
1235066..1236193
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AA seq
375 aa
AA seq
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MIKIGSHVSFSDKGLLNAAREAVSYGSGTFMIYTGAPQNTRRKPIETQYIEEGREVMQEH
GIGEIVVHAPYIINLGSYKDNTYELAVQFLQDEIRRTDYLGVKNIVLHPGAFTDKDAEYG
LARISEGLNEVLAGVKDTGVHIALETMAGKGTEMGRSFEELAQIIDKVEDNGRLTVCLDT
CHIHDAGYDVVGDLDGVLDQFDRVVGLDRIGVVHLNDSKNPRGASKDRHAPVGAGWIGFE
AMNRVVHHEKLLGLPMILETPWIGKDPKTQRPMYEAEIALLSGTVLERFGASFVEDVERL
ASFFEKKEVDSRGFVLQTWELLKTDAKAKKADGREPMERLYDMIAEERLFPELSEEQINQ
RLTAWFAGKDLLKSL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaatcggttcacacgtttcattttccgacaaaggtttgctgaatgcggcccgg
gaagctgtctcgtacggctccggcacattcatgatctacacgggtgcacctcagaataca
cggcgcaagcctattgaaacgcaatatatcgaagagggccgggaagtcatgcaggagcac
gggatcggcgagatcgtcgttcatgccccttacattatcaacctgggttcctacaaagac
aacacgtacgagctggcggtccaattcctgcaggatgaaatccgccgcacggactatctg
ggcgtgaaaaatatcgtgcttcatcccggcgcgtttacggacaaggatgcggagtacggc
ctcgcccgcatttcggaagggcttaacgaagtcctcgccggcgtcaaggacacgggtgtg
catatcgccctggaaactatggcgggcaaaggcacagagatgggccgcagcttcgaggag
ctggcgcagattatcgacaaggtcgaagacaacggccgcttgacggtatgtctggatacg
tgccatatccacgatgcagggtatgatgtcgtaggcgacctggacggcgtgctggatcag
ttcgaccgcgtggtcggtctggaccgcatcggggtcgtccaccttaacgacagcaagaac
ccgcgcggcgcgtccaaagaccgccatgctccggtcggagcgggctggatcggcttcgag
gcgatgaaccgcgtcgttcatcacgagaagctgctcggcctgccgatgatcttggagact
ccgtggatcgggaaggacccgaaaacccagcgtccgatgtacgaagcggaaatcgcgctg
ctcagcggaaccgtcctggaacgtttcggcgcatcctttgtggaagacgtggagcggctg
gcttcctttttcgagaagaaagaggtcgattcgcgcggcttcgtcttgcagacctgggag
ctgctcaaaaccgacgcgaaagccaagaaagcggacgggcgcgaaccgatggagcgcttg
tacgacatgatcgcggaagagcgtctgttcccggagctgtccgaagagcagatcaatcag
cgcctgacggcatggtttgcgggcaaagatctgctgaaatctctgtaa
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