Paenibacillus chitinolyticus: PC41400_08665
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Entry
PC41400_08665 CDS
T06610
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pchi
Paenibacillus chitinolyticus
Pathway
pchi03030
DNA replication
pchi03430
Mismatch repair
pchi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PC41400_08665
03430 Mismatch repair
PC41400_08665
03440 Homologous recombination
PC41400_08665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchi03032
]
PC41400_08665
03400 DNA repair and recombination proteins [BR:
pchi03400
]
PC41400_08665
Enzymes [BR:
pchi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PC41400_08665
DNA replication proteins [BR:
pchi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PC41400_08665
DNA repair and recombination proteins [BR:
pchi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PC41400_08665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QAV17731
UniProt:
A0A410WTT1
LinkDB
All DBs
Position
1885317..1889540
Genome browser
AA seq
1407 aa
AA seq
DB search
MNSFVHLHVHSEYSLLDGAARIQDLVETASQLGMKSLALTDHGVMYGAVPFYKACRAKGI
KPILGCEAYFTEGTIRTKGTRQEQPIYHLILLAKNMQGYQNLMKLCSVGHLEGFHYKPRI
DHDHLARYSEGLVCLSACLGGEVSQHLLHDRKEQAKAAAERYRSIFGEDFYLEIQDHGSI
EQKKVMQGMIELSRETGIPLVATNDVHYVREQDHVVQDVLLCIGTGKTVDDPQRLKFETS
QLYLKSEDDMRKLFAHVPEALDNTLLVAEKCELVLNFDQSILPKFKPIPEGLSAGEYLKE
LCTEGLARRYENQPGWNDLQGEYRQTLETRLSYELGVIESMGFSDYFLIVWDFIRFSHEH
GIMTGPGRGSSAGSLVAYVLRITDVDPIRYKLLFERFLNQERITMPDIDIDFNDERRDEV
IDYVVAKYGQEHVAQIITFGTMAAKAAVRDVGRVLNVPYNEVDRAAKMIPGQLGMTLEAA
LKVNPDLKDLAEKQPKTAELLNMAKRVEGMPRHASTHAAGVVISREPLTHYVPLQEGTGQ
TPLTQYSMEHLEAIGLLKMDFLGLRTLSIIERTLKSIEEQEGIKLDLAKLDMDNDPLTYE
LLGKGETTGIFQLESPGIRKVLRDLKPSGFEDIISVNALYRPGPMEFIPRYIECKHGLTE
PQIPHEALVPILKDTYGIIVYQEQIMQIASVMAGFSLGEADLLRRAVSKKKREVLDEQRA
HFVEGSVGLGYKEEEANGVYDMIVRFADYGYPRAHATAYGVLAFQTAYLKAHYPRHFMAS
MLTAVVGNHRKTAEYVDECRRMKLEVLPPDVNESGVNFTPVAPKATLQVEEGTDEGHAGT
DNGDKDREEAAVTAESIRSKGEDRIIGDSGESAKNDAGASPGGKGAIRFGLAAIKNVGTN
AIEAILKERREKPYESLLDFCRRVDLRVCNKRVIESLIQGGALDGFPGHRAQFVAMLDDT
VEAAVKWRKERDDLQLHLFGFVEEPNWEVEIPQVAKLSRTQQLEYERELLGLYISGHPLD
DHQELLQELEADPLHYLQDYADNSEVIVAGMVVSSKTIVTKKGQPMAFMDLEDRIARVEV
VLFPEAWKKHAPLVQKGSVVLVKAKLQLQDEDPPKLLAEAVAAPDDPAVRRWQRRPLRPG
GQSASGGSAPRGAGTPPQGGRAGERGAAAGNARSGQPGEGPGAGSGANVNPGAGTRPGGE
AGAQAGVSGGARSAEGGGRADAVSGRAQAPGRAAGSARGSSVVRETRRGAAGYGVGEPGP
AAGEARSGQDGGPRPGGGASAHAGSTGANAGQPGSSGRAADRGSGAPQRSSAAKPADESG
RPAAQGTPAGTSRQRVYVKIAAHMEEPHNLVKLQELLQLHAGPLEVALFYERTQRLLALS
GQYRVKPSPELFRSIEQLMGKDCVKVK
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtttgtacatctgcatgttcacagtgaatacagcctgcttgacggggccgcc
cgcatccaggacctcgtggaaaccgcctcgcagttgggcatgaagtcacttgcgctgacg
gatcatggcgtcatgtatggggcggtaccgttttataaggcatgccgggccaagggcatc
aagcctattctgggctgcgaagcttattttacggaagggacgatccgcaccaagggaacg
cggcaggagcagccgatctatcatctcattctgctggccaaaaacatgcagggctatcag
aacctgatgaagctgtgctcggtcggtcatctggaaggattccactataaaccgcgcatt
gatcacgaccacctcgcccgctattcggaagggcttgtttgtctgagcgcatgcctgggg
ggagaggtgtcccagcatctgctgcacgaccgcaaggaacaggcgaaagcggccgccgag
cggtatcgttctattttcggcgaagatttttatctggaaattcaggatcacgggtccatc
gagcagaaaaaagtcatgcaaggcatgatcgagctgagccgagagacgggcattccgctt
gtcgccaccaacgacgtgcattacgtcagggaacaggatcatgtggtgcaggatgtgctt
ctgtgcatcggaaccggcaagacggtggacgatccccagcgcctcaagttcgaaacgagc
cagctttacctgaaaagcgaagacgacatgcgcaaactgttcgcacatgtacccgaggcg
ctcgacaatacgctgcttgtggcggagaagtgcgaactggttttgaatttcgaccagtcc
atcctgccgaaattcaaaccgatccccgaggggctcagcgcgggagaatacctcaaggag
ctgtgcacggaggggcttgcccggcgctacgaaaatcagccgggctggaatgacctgcag
ggggaataccgtcagacgctggagacgaggctttcgtacgagcttggcgttatcgagagc
atgggcttctcggattattttcttatcgtctgggattttatccgcttctcgcacgagcac
ggtattatgacgggacccggaagggggtcttcggcaggaagtctcgttgcgtacgtgctc
cggattaccgatgtggaccctattcggtataagctgctctttgagcgttttctgaaccag
gagcggatcacgatgccggatatcgatatcgattttaacgacgagcggcgggacgaagtt
atcgattatgtcgtggcgaagtacgggcaggaacacgtcgctcagatcatcacgttcggg
acgatggccgccaaggccgccgtacgcgatgtgggccgggtgctgaacgttccgtacaac
gaagtggaccgtgccgcgaaaatgattccggggcagctcggcatgacgctggaagcggcc
ctgaaggtgaacccggatctgaaagatctggccgagaagcagcctaaaaccgcggaactg
ctgaatatggcgaaacgtgtcgagggcatgccccgtcatgcttcgacacatgccgcggga
gttgtcatttcgcgcgaaccgctgactcattatgttcccttgcaggagggaaccggccaa
acaccgctgacccaatattcgatggagcatctggaagccatcggtctgctgaagatggat
tttctcggtctgcggaccttgtccatcatcgaacggaccttgaaatccattgaggagcag
gaaggcatcaaactggatttggcgaagctggacatggataacgaccctctgacgtacgag
cttctcgggaaaggggagacaaccggtattttccaactggagtctccgggaatacgcaag
gtgcttcgggatctgaagccgtcgggatttgaagatatcatttccgttaacgccttgtac
cgtccgggtccgatggagtttatcccccggtacatcgaatgcaagcacggactgacggag
ccgcagattccgcatgaagcgctggtgccgatccttaaggatacgtacggcattatcgtc
tatcaggagcagatcatgcagatcgcttcggtcatggcgggattttcgctcggcgaagcg
gacctgctccggcgtgccgtttccaagaagaagcgcgaagtgttggatgagcagcgcgca
cacttcgtggaaggcagcgtcgggttaggctataaggaggaagaggcgaacggcgtctac
gacatgatcgtgcggttcgcggattacgggtacccgcgtgcgcatgcaaccgcttatggc
gtactggctttccagacggcgtacttgaaggcacattatccgcggcattttatggcttcc
atgctgacggccgtcgtcggtaatcaccggaaaacggccgagtatgtcgacgaatgcaga
cggatgaagcttgaagtgcttccgccggatgtgaatgagagcggcgttaattttacgcct
gtcgctcctaaagcaaccttgcaggttgaggaagggacagacgaagggcatgcagggacg
gacaacggagataaggaccgcgaggaagccgccgttacggccgaaagcattcgttctaag
ggagaagaccggataatcggggattccggggaatctgccaagaacgatgccggcgcttct
cccggcggtaagggtgccatccgcttcggtctggccgcgatcaaaaacgtcggcacgaac
gctatcgaagcgatcctcaaggagcggcgggagaaaccttacgagagtctgctcgatttc
tgccggagagtggatctgcgcgtctgcaacaaacgcgtgatcgaatcgctcattcaggga
ggggcgcttgacggctttcccggtcaccgcgcccaatttgtcgctatgctggacgatacg
gtggaggcggcggtgaaatggcggaaagagcgggatgatctgcagcttcacttattcggc
ttcgttgaggaaccgaactgggaagtggagattccgcaggttgccaagctttcccgcaca
cagcagctggagtatgaacgtgaactgctgggactttatatatccggtcatccgcttgat
gaccatcaagagctgctgcaggagctggaagcggacccgctgcattatttgcaggattat
gccgataacagcgaagttatcgtggcgggtatggttgtctccagcaaaacgatcgtcacg
aagaaaggccagcctatggccttcatggatctggaagaccggattgcgcgggtcgaagtg
gtcttgttcccggaagcgtggaaaaaacatgctccgctcgtgcagaaaggcagcgtcgtc
cttgtcaaagcgaagcttcaactgcaggacgaagacccgccgaagctgctggcggaggca
gtggccgcgccggacgatccggccgtccgccgctggcagcgccgcccgctgcgtccgggc
ggccagtccgcctccggcggcagtgcgccgcggggagccggaactccgccgcaaggaggg
cgcgccggagagcgcggcgctgcggccgggaacgcccgcagcgggcagccgggcgaaggc
cccggagcaggcagcggcgcgaatgtgaacccgggcgccggcacgcgcccgggcggcgaa
gccggcgcccaagcgggcgtaagcggcggcgcacggtctgccgaaggcggcggccgggcg
gacgcggtctccggacgcgcacaggcgcccggccgtgccgcaggctctgcgcgcggctcc
agtgtggtgcgcgagacgcgccgcggtgccgccggctatggcgtcggagagcccggccct
gcagccggcgaagcccgcagcgggcaagacggcggcccgcgtccgggcggcggagccagc
gctcacgcgggctcgaccggcgccaacgcggggcagcccggctcgtccgggcgagccgca
gaccgcggcagtggggccccgcagcgctcatccgcagccaagcctgcggatgagtcaggg
cgccccgccgcgcagggcacacccgccgggacgtcccggcagcgggtgtacgtcaagatt
gcggctcatatggaagagccgcacaaccttgtgaagctgcaggagctgctgcagcttcac
gcgggcccgctggaggtcgcgctgttctacgagcgcacccagcggctgctggctttgagc
ggccaataccgcgtcaagccttctcccgagctgtttcgttccatcgaacagctgatgggc
aaagattgtgtgaaggtgaaataa
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integrated database retrieval system
