Paenibacillus chitinolyticus: PC41400_09475
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Entry
PC41400_09475 CDS
T06610
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pchi
Paenibacillus chitinolyticus
Pathway
pchi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PC41400_09475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchi03400
]
PC41400_09475
Enzymes [BR:
pchi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PC41400_09475
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PC41400_09475
DNA repair and recombination proteins [BR:
pchi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PC41400_09475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
QAV17884
UniProt:
A0A410WU72
LinkDB
All DBs
Position
2070607..2071467
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AA seq
286 aa
AA seq
DB search
MPELPEVETVRRTLSRLVVGKTIREVEVRLKRIIQKPEEPELFADLLEGQTIQGVSRRGK
FLRFLLDDGVLVSHLRMEGRYGLYEGSDEVEPHTHVIFRFTDGTELRYRDVRQFGTMHLF
AGEEDLSSKPLHKLGIEPLDESFTFDAFRQAIGKRSTKIKPLLLNQAYIVGLGNIYVDEA
LFLAGIHPEREAASLTRLELQKLHEAIVHTLKSSVEAGGSSIKSYVNGQGESGNFQHSLN
IYGRNGKPCVTCGSLIEKTVVGGRGTHFCLKCQPLKRKRSTPKNKL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccggaggtggagaccgtcagacggacactcagccgactggtcgtcggc
aagacgatccgagaagtggaagtccgcctgaaacggattattcaaaaacccgaagagccg
gagctattcgccgatcttctggaaggccagacgattcagggcgtgagccgcagaggcaag
tttctgcgcttcctgctcgatgacggcgtgttagtatcccatcttcgtatggaaggccgc
tacggcctctacgaaggttcggacgaggtggaacctcacacgcatgtgatcttccgcttt
acggacgggaccgaactgagataccgcgatgtgcggcagttcggcacgatgcatcttttc
gcgggagaggaagatctgagcagcaagccgcttcataagctgggcattgagccgctggac
gagtcctttacgttcgatgcgttccgtcaggccatcggcaaacggagcacgaagattaaa
ccgctgctgctcaatcaagcatacatcgtcggactcggtaatatttatgtagacgaggcg
ctttttctggcgggaattcatcccgagagggaagcggcttcgctgacccgccttgagctt
cagaaacttcacgaagcgattgtccataccctcaaaagctcagtcgaggccggtggctct
tccattaaatcgtacgtaaacggccaaggcgaatccgggaatttccagcattccctgaac
atttacggccggaacggcaaaccctgcgttacctgcggcagcttgatcgagaaaaccgtt
gtcgggggccggggcacgcatttctgcctgaaatgccagcctctcaaaagaaagcgcagc
acgccgaaaaataagctttag
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