Paenibacillus chitinolyticus: PC41400_12105
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Entry
PC41400_12105 CDS
T06610
Name
(GenBank) HAMP domain-containing protein
Organism
pchi
Paenibacillus chitinolyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
4HB_MCP_1
GAF_2
GAF
TarH
HAMP
cREC_REC
GAF_3
Oxidored_nitro
VpsR
ATG14
Fmp27_WPPW
Motif
Other DBs
NCBI-ProteinID:
QAV18373
UniProt:
A0A410WVN3
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All DBs
Position
2598843..2602520
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AA seq
1225 aa
AA seq
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MKISTKLMAGFGLLFILMFVLAGIGTTRISSIDESLDSAFVNRFNKTRLAYTARSDVNSI
AKYMANLLLNSDPNQPGAKENLAKANTYKEKLKEGVAALQKSADSDVEKQLTYETVKSTE
NFMSYLNQAIELYDNGKVAEANKLRTDIGVSYQDQVTESVDHLTQYLDDNVQKGINEFKA
SNSKTLLLTILLTVAALVIGLGIMYWIMRSLSRGLALLTGMIKGFGNGRFDPGYRVEVTT
TDEFGKVAEVFNVMADDLEELMHNERTFNKQNEDQAWLKSNVANMSMLLQDQTNMHDLTN
SFISEASRMIGATFGAVYLLEREGMRTRLVLSSAYAFDKDPEDNLLPEFALGQGLVGQAA
ADGRRIMVQDEVDTYLTIQSSFGQLDAKYLVVEPVVSEEEVGAVVEFAGLKMLSENELDL
LEQLTENLAVSIGRIRSRERVEELLRMSQALTEELQSQSEELISQQEELRTSNEKLEEQT
KALKASEELLQSQQEELEQNNEELLRKTKQLQTQVQETELANRQIEEAKEALEKQAFELA
MASKYKSEFLANMSHELRTPLNSMLILSQMLAENKDSNLYDKQVEYAETIHSSGSDLLKL
INDVLDLSKVEAGKVEVQAEYVLVPDIMETIQRSFEQVARKKALGFEITIDSGVPRMLYT
DSMRLEQILRNLLSNAFKFTSQGSVLLHVYPVKEGEPQIAFSVKDTGIGIAEEKQQIIFE
AFQQADGTTSRQFGGTGLGLSISKQLAGLLGGTIEICSREGEGSTFTLFIPHRKYSERVG
GSAEAAAAGQEQQALPLPDAPAVPQLPAPAPVPVKPVPKAAQREVEDDRGSITENDKVLL
IVEDDVHFMNVLVDMARSRGFKALVAMQGDIGLQMAKEYKPDGIILDIQLPIVDGWSILV
QLKNNAETRHIPVHVMSVVDEVHQGLSMGAIAYMRKPSSKDVLEQAFIELEGFIDQNLRK
LLLVEDDPVQMNNLIELIRHDDVLIEVATTADEAIVKLRERHFDCMVLDIGLADHSAFDL
LERIKAEEELRRLPIVIYTEKEYDKKDEMRLKKYAESIIIKNVKSPERLLDETALFLHRV
EETLPEEKKRILQRLHSSEAVFAGKKVLLVDDDIRNVFALSNLLEGYNMKVLFAETGRQA
LSILEKEPDLDLVLMDIMMPEMDGYEAMKEIRSMPQFDNLPIIALTAKAMRDDREKCIRA
GASDYITKPINNDQLMSLIRVWLFK
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatcaacaaagctcatggcgggtttcgggcttttgtttatcttgatgttcgtg
ctggcgggaatcgggacgactcggataagcagtatcgacgagagcctcgatagcgcgttt
gtcaaccgttttaacaagacacggttggcctacacggcccgctcggacgtcaattcgatc
gccaaatatatggcgaatctgctgcttaactcagatcctaatcagccgggagccaaggaa
aacctggctaaagcgaacacttacaaagagaagctgaaagaaggggtggccgctctccaa
aaatccgccgattcggatgtggagaagcagcttacctatgagacggtcaaaagcaccgaa
aattttatgtcctacctgaatcaggcgatcgagctttatgacaacggcaaggtagcggaa
gcgaacaaactgagaaccgatatcggcgttagctatcaagatcaggtaacagagagcgtg
gatcatttaacgcaatatctggacgataacgtacaaaaagggattaacgaatttaaagct
tccaacagcaaaacgctgctcttgacgattctgctgacggttgctgctctggtcatcggc
ctagggatcatgtactggatcatgcgcagcttgtcccgcgggctcgccctgctgaccggc
atgatcaaaggtttcggcaacggccggtttgacccgggataccgcgttgaggtgacgacg
acggacgaattcggcaaagtagccgaagttttcaacgtgatggccgacgatctggaagaa
ttaatgcacaacgaacggaccttcaacaagcagaacgaagatcaggcatggctgaagtct
aacgtggcgaacatgagcatgctccttcaggatcagacgaacatgcacgacttgacaaac
agttttatttcggaagcgtcccgcatgatcggcgccacgttcggagcggtgtatctgttg
gagcgggaaggtatgaggacgaggctcgttctgtcctcggcttacgctttcgacaaagat
cccgaggacaatcttctgcccgagttcgcgctcggtcaaggtcttgtaggccaggcggcc
gccgacggccggcggatcatggtccaggacgaagtggatacgtatttgactatccaatct
tctttcggacagttggacgcgaagtatctcgttgtggagccggtcgtgtccgaagaagaa
gtcggagccgtcgttgaatttgcgggactgaaaatgctcagcgagaatgaactggatctg
ctggagcagttgacggagaatctcgcggtttccatcgggcggatccgttcccgcgaacgg
gtcgaggagctcctccgcatgtcgcaggccttgacggaggaactgcaaagccagtccgaa
gagctcatttcccagcaggaagaactgcgcacttccaatgagaagctggaggagcagacg
aaggcgctgaaagcgtccgaagagctgctgcagtcccagcaggaagagttggagcagaat
aacgaagagctgctccgcaaaacgaagcagctccagacccaggttcaagaaacggagctg
gctaaccgccagatcgaggaagccaaggaagcgctggaaaagcaggcgttcgagctggcg
atggcttcgaagtacaaatccgaatttttggccaatatgtcgcatgaactgcgtacgcct
cttaacagtatgcttattctttcgcagatgcttgcggagaataaagacagcaacctgtac
gacaagcaggtggaatacgcggagacgattcactcttccggctccgatttgctcaaattg
atcaatgatgtcctcgacctttcgaaggtagaagccgggaaagtggaggtccaggccgag
tatgttctcgtgccggatatcatggaaacgatccagcgttcgtttgaacaagtcgcgcgc
aagaaggcgctgggctttgaaattacgatcgacagcggcgttccgcgcatgctctatacg
gacagcatgcggctggagcagattttgcggaatctgctgtccaacgcctttaaattcacg
tcccaaggctccgtacttctgcatgtctatcccgtcaaggagggagagccgcaaatcgct
ttctccgtcaaggatacgggaatcgggatcgccgaagagaagcagcagattatcttcgaa
gcgttccagcaggccgacgggacgacgagccggcagttcggcggaacgggactcgggctg
tccatctccaagcagctcgcgggcctcctcggcggtacgatcgaaatctgcagccgggaa
ggggaaggcagcacgttcacgctgttcatcccgcaccggaagtattccgagcgcgtagga
ggatcggccgaggcggctgccgctggacaggagcagcaggcactgccgctccctgacgcg
ccggcagtgccacagcttccggcacctgcgcccgtgccggttaaaccggttccgaaagcc
gcccagcgagaggtggaggacgaccggggcagcatcaccgagaacgataaagtgctgctg
atcgtggaagacgacgtgcactttatgaacgtgctcgtcgacatggcccgcagccgcgga
tttaaggctctggtcgcgatgcagggggatatcgggctgcagatggcgaaagagtataaa
ccggacggcatcatcttggatatccagctgccgatcgtcgacggctggtcgattctcgtc
cagctcaagaacaacgccgagacccggcatatcccggtgcacgtgatgtcggtagtcgac
gaagtgcaccaggggctctctatgggcgcgatagcctatatgcgcaagccttccagcaag
gatgtgctggagcaagcctttatcgagctcgaaggattcatagatcaaaatctgcggaag
ctcctgcttgtagaggatgatcccgtccaaatgaacaatctgatcgagcttatccgtcac
gacgatgtccttatcgaagtggcgacaacggcggatgaagcgatcgtgaagttaagagag
cggcatttcgactgcatggttcttgatattggcctagcggaccactccgcattcgatctg
ctggagcggatcaaagcggaggaagagcttcgccgtctgccgattgttatttacacggaa
aaagaatacgataagaaagacgagatgagacttaagaaatacgcggagtccatcatcatc
aagaacgtaaaatcgccggaacggctgcttgacgaaacggcgctgttcctgcaccgggtg
gaagaaacactgccggaggagaaaaagcggattctgcagcgtcttcacagcagcgaagcg
gtatttgccggcaagaaggtacttctcgtcgatgacgatatccgcaacgtgtttgcgcta
tccaacctgctggaaggctacaatatgaaggtgctgtttgcggagaccggacgccaagcc
ttgtccattcttgagaaggaaccggatcttgatctcgttctgatggatatcatgatgccg
gaaatggacggttatgaggctatgaaggagatccgcagcatgccgcaattcgataatctg
ccgattatcgccttgaccgcgaaggccatgcgggatgaccgggagaagtgtatacgggcc
ggcgcgtcggattatataacaaaaccgataaataatgatcagttaatgtctctaattcgc
gtttggttgtttaagtaa
DBGET
integrated database retrieval system
