Paenibacillus chitinolyticus: PC41400_12155
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Entry
PC41400_12155 CDS
T06610
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03090
RNA polymerase sigma-B factor
Organism
pchi
Paenibacillus chitinolyticus
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchi03021
]
PC41400_12155
Transcription machinery [BR:
pchi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PC41400_12155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_r2
Sigma70_ECF
HTH_23
HTH_38
HTH_10
GerE
HTH_50
Terminase_5
DUF1492
KORA
HTH_Tnp_ISL3
Phage_antitermQ
HTH_36
HTH_29
HTH_3
Cyclophil_like2
NirdL-like_HTH
HTH_Tnp_4
UPF0122
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
QAV18383
UniProt:
A0A410WVP3
LinkDB
All DBs
Position
2610043..2610822
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AA seq
259 aa
AA seq
DB search
MKLQSERKEMEHIHDLIRQYQETECNDIATSLLIQYESTVKMAAAKMSRNRPDLYEDLIQ
IGQISLLKLFKQFDPSHGVQFDAYMMKSIIGHMKNYLRDKSWYIQVPRRIKEKGFQIQQA
IDHLTMRLERSPNVNEIAEELGLTVEETIEILAGRECYHYVSLDMPLSTEENGSTIGDVL
GTQVDEYLNVDNKLDLQEALSHLKPEEQKVLMLAYVDGYSQRTIAQDLGVSQMSVSRIQR
RALDKLRKYFEKNKPGEGA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacaatccgagaggaaagagatggagcatatccatgatctgattcgacagtat
caggaaaccgaatgcaatgatatcgctacctctttgcttattcaatacgagtctactgtg
aaaatggctgcagcgaagatgtcccgcaaccgaccggatctgtatgaagatctgattcaa
atcgggcaaatctccctgttgaagctgtttaaacagtttgacccttctcacggtgtgcag
tttgatgcttatatgatgaagagcattatcggccacatgaagaattatcttcgtgacaag
tcctggtatattcaggttccgagacggattaaagaaaaaggattccagatccaacaggcg
atcgatcatctgacgatgcggctggaacgctcccccaatgtcaatgagattgcggaagag
ctgggtctgacagtcgaggaaacgattgaaattttggccggacgtgaatgctatcattat
gtgtccttggacatgccgctttcaacggaagagaacgggtcgacgattggcgatgtattg
ggtactcaagtggatgagtatctcaatgtcgacaataaactcgatttgcaggaggcgctg
agccacctcaagcctgaggagcagaaagtcctgatgctggcttacgtggatggatattcg
caaagaaccatcgcccaggatcttggcgtttctcaaatgagcgtatcccgtattcagcga
agggcgctggataagctgcgcaaatatttcgagaagaacaagcccggtgaaggagcttga
DBGET
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