Paenibacillus chitinolyticus: PC41400_12455
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Entry
PC41400_12455 CDS
T06610
Symbol
lsa
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
pchi
Paenibacillus chitinolyticus
Pathway
pchi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PC41400_12455 (lsa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchi02000
]
PC41400_12455 (lsa)
01504 Antimicrobial resistance genes [BR:
pchi01504
]
PC41400_12455 (lsa)
Transporters [BR:
pchi02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
PC41400_12455 (lsa)
Antimicrobial resistance genes [BR:
pchi01504
]
Gene variants
Macrolide resistance genes
Transporters
PC41400_12455 (lsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
YobI-ATPase
ABC_tran_Xtn
AAA
Dynamin_N
DUF4024
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QAV18443
UniProt:
A0A410WVV2
LinkDB
All DBs
Position
2687641..2689119
Genome browser
AA seq
492 aa
AA seq
DB search
MSLIRVSNLTFAYDGSYDNIFEEVSFQIDTDWKLGFTGRNGRGKTTFLNLLLGKYEYSGT
ISAQVQFEYFPYPVDHKENLTLDVIRDIFPDYVHWELMRELSLLKVSEDVLDRPFDSLSN
GEQTKVMLATLFLKENSFLLIDEPTNHLDMEARKLVSSYLRNKNGFILVSHDRAFLDHCV
DHILSINKTNIEIRKGNFSDWWTNKEMQDEFELAENEKLKKDIKRLSDAAKRTNNWSHEV
EKTKNGTRNSGSKVDKGYIGHKSAKMMKRSKNIEQRQQSAIEDRSHLLKNIESSESLKIS
QLVYHKSQLAELDHVSIQYGDKTVCSDISFTVEQGERIALSGKNGSGKSSILKLILGEDI
DYTGTFRKGSGLKISYVSQDTAHLRGSLSDYARENGIDESLFKSILRKLDFARVQFEKDI
SSYSGGQKKKVLIAKSLCENVHLHIWDEPLNFIDVISRMQIEELLLEHKPTLLFVEHDRE
FCDNIATQVVEL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgattagagtctctaacctgactttcgcttatgacggcagttacgataacata
ttcgaagaggtaagctttcagatcgataccgattggaaattaggttttaccgggagaaac
ggccgggggaagaccacgttcctgaacttgctgctcggcaagtacgaatacagcggaacg
atttccgcccaggtccagtttgaatattttccttatccggtggatcacaaggaaaatctg
acgctggatgtgatccgcgacatttttccggattatgttcattgggaactgatgcgcgag
ctttccttgctcaaagtttccgaggatgtgctggaccggccttttgactcgttatcgaac
ggagagcagacgaaagtgatgctggcgaccttgtttcttaaggagaatagctttctgctc
attgacgaaccgaccaaccatctcgacatggaagcgcgcaaactggtcagcagctatctg
aggaacaaaaacggatttattttggtctctcacgacagggcttttctcgatcactgcgtc
gatcacattctgtccattaacaagacgaatatcgaaatccggaaaggcaacttctcggac
tggtggacaaacaaagaaatgcaggacgaatttgagcttgcggagaacgaaaagctgaaa
aaagacatcaaacggctgtcagatgcggccaaacggacaaacaactggtcgcatgaggtc
gagaagacgaaaaacgggacaagaaattccggttccaaggtagataaaggatacatcggt
cacaagtctgccaaaatgatgaaacgctccaaaaacatcgagcaaagacagcagtccgcg
attgaagatcgttcgcatctcttaaaaaacatcgaaagctccgaaagcttgaagatttcc
cagcttgtttatcacaaaagccagcttgccgagcttgaccacgtgtcgattcaatacgga
gataagacggtctgcagcgatatcagctttacggtggagcagggagagcggattgcgctt
tcgggtaaaaacggttccggaaaatcaagtattctgaagctgattctcggcgaagatatc
gactacacgggcactttccgaaaggggagcgggctgaaaatatcctacgtatcgcaggat
accgcgcatcttcggggcagcttatccgactacgcccgggaaaacggaatagacgaaagc
ctgtttaaatcgatcttgagaaaactggatttcgcgcgggtccaattcgagaaggacatt
tcgtcttatagcggcgggcagaaaaagaaggtgttgatcgccaaaagtctgtgcgagaac
gttcatctgcatatctgggatgagccgcttaacttcatcgacgtcatttcacggatgcaa
attgaagagctgctgcttgaacataagccgacccttctttttgtggagcatgaccgtgaa
ttttgcgacaatattgcgacccaggtagtggagctttaa
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