Paenibacillus chitinolyticus: PC41400_21070
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Entry
PC41400_21070 CDS
T06610
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pchi
Paenibacillus chitinolyticus
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchi03009
]
PC41400_21070 (rimO)
Enzymes [BR:
pchi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PC41400_21070 (rimO)
Ribosome biogenesis [BR:
pchi03009
]
Prokaryotic type
ribosomal protein modification factors
PC41400_21070 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QAV20017
UniProt:
A0A410X0B2
LinkDB
All DBs
Position
complement(4671041..4672369)
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AA seq
442 aa
AA seq
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MTEKVRVVTLGCEKNLVDSEIMSGLVDQRGYSVVENNEEATVIIVNTCGFIDAAKEESVT
TILDMADLKRTGNLKALIVSGCLTQRYKEELMKEMPEIDGIVGTGDFHNINAIIDEALKG
KKPVYVGNPVFNYEQALPRKVSTPRYTAYVKIAEGCDNACTFCSIPIMRGKFRSRSMESV
ISEARQLASQGVKEVSLIAQDSTNYGTDLYDKFMLPELLNRVSEVEGIEWVRLHYAYPGF
FTDELIETMAANPKICKYIDMPLQHSSDAILKRMRRPGREKDARELILKIRKRMPDAALR
TSLIVGFPGETEEDFEHLVQFVQDVQFDRLGVFTYSMEENTPASRLPGQVPDEVKEYRAA
ALMELQREISNRRGGRRLGEAVDVLIERYDGRNDVYIGRSQYDAPEIDGEVFVTGTNIGI
GGVVKVRVTHSFEFDLSGEVIA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaaggtaagagtagtaacgcttggatgtgagaaaaacttggtggattccgag
atcatgtccggactggtcgatcagcgagggtacagcgtggtcgagaacaacgaagaagct
accgtgattattgtaaatacgtgcggatttatcgatgccgccaaagaagaatcggttact
accattctggatatggccgatcttaaaagaaccgggaatttgaaagcgctaatcgtttcg
gggtgtctgacacagaggtacaaagaagaactgatgaaagaaatgcctgagattgacggg
attgtgggaacgggcgattttcacaacatcaatgccattattgacgaagccctgaaaggc
aaaaagccggtctatgtcgggaatccggtgtttaactatgagcaagcgcttccgcgtaag
gtttctaccccccggtataccgcatacgtcaaaatcgcggaaggctgcgataacgcctgt
acgttctgctccattccgattatgagggggaaattccgcagccgttcgatggagtccgtt
atttcggaagcgcggcaattggcgtcgcaaggggttaaggaggtcagcctcatcgcccag
gattccaccaattacggaacggatctgtacgataagttcatgcttcccgaactgctcaat
cgtgtgagcgaagtggaaggcatcgaatgggtcaggctgcattacgcctatcccggattt
tttacggatgagctgatcgaaacgatggcggccaatccgaagatttgcaaatacatagat
atgccgcttcagcacagctccgacgctattctcaagcggatgagacggcccggaagagag
aaggacgcccgggaacttattctcaaaatacgcaaaagaatgccggatgcggctttgcgg
acttcgcttatcgtcggatttccgggtgaaacggaagaagatttcgaacaccttgtgcag
ttcgttcaagatgtccagttcgaccggctcggcgtattcacttattcgatggaagaaaac
acaccggcgtcacgccttcccggccaggtgccggacgaggtaaaagaataccgcgcggcc
gctctgatggagcttcagcgcgaaatatccaaccgccgagggggccgcagactgggcgaa
gcggtggatgtgcttatcgagcgctacgacggccgcaacgatgtgtatatcggccgttcc
caatacgatgcgccggaaatcgacggggaagttttcgtaacaggtactaatatcggaata
ggcggcgttgtaaaagtgcgggttacccactcctttgaattcgacctctccggggaggtt
atcgcataa
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