Paenibacillus chitinolyticus: PC41400_21195
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Entry
PC41400_21195 CDS
T06610
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pchi
Paenibacillus chitinolyticus
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pchi03016
]
PC41400_21195 (truB)
Enzymes [BR:
pchi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PC41400_21195 (truB)
Transfer RNA biogenesis [BR:
pchi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PC41400_21195 (truB)
Prokaryotic type
PC41400_21195 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QAV20040
UniProt:
A0A410X097
LinkDB
All DBs
Position
complement(4698596..4699531)
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AA seq
311 aa
AA seq
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MTIEGILPILKPKGMTSHDVVAKARRFLGIKRIGHTGTLDPEVTGVLPLCIGRATRMVEY
IQELPKQYEAVMVFGLATDTEDLSGNVLEEIPHVQLAEDKVRSVIQSFVGEISQVPPMYS
AVKVDGKRLYELARAGVEVERKARNVTIYEIELLELDLNRYHPEVRFRVLCSKGTYIRTL
CVDIGRALGVPAAMKELVRSSTGRIGLEQCVALEDLPRLREEGLLDTKIIQADQAVDYLP
SLVLNEQLSVFALQGRKVRLHEKPALHGSHDSETGVEQTGIIRVYDPHKRFIGLFSWNET
EGHLAPVKVFN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacgatagaaggaatacttccaatcctcaagccaaagggaatgacttcccacgatgtc
gtagcgaaagcgcgccgttttcttgggattaagcggatcggtcataccggtacgcttgat
cctgaggtaaccggcgtgctgccgctttgtatcggccgcgcaacccgcatggtcgaatac
atccaggagctgccgaaacagtatgaggcagtcatggtttttggattggctaccgacacg
gaagacctgagcgggaacgttctggaagaaattccgcacgttcagcttgcggaggacaaa
gtccgttccgttatccagtcgttcgtcggagagatcagccaggttcccccgatgtattcc
gccgtaaaagtcgacggaaagcggctctatgagctggcgagagcgggcgtggaagtcgag
cgtaaagcccggaacgtaaccatttacgagatcgagctgctcgaactggacctgaaccgg
tatcacccggaagtccgtttccgcgtgctctgctcgaaaggcacctatatccgtaccttg
tgtgtggatataggaagagccctgggcgttccggccgcgatgaaagagctggtccgctct
tccaccggacgaatcggactggagcaatgcgtggcactggaagacctccctcgtttgcgc
gaggagggtcttctggatacaaagatcattcaggcggaccaggctgtcgattatttgcct
tctctcgtgctgaatgagcagctgtccgtttttgccctgcagggacgcaaagtcaggctc
catgagaagccggctctgcatggtagtcacgatagcgaaaccggagtagaacagacggga
attattcgtgtttatgatcctcataaacggtttatcggtcttttttcctggaacgagacc
gaaggacatcttgctcccgtcaaagtttttaattag
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