Paenibacillus chitinolyticus: PC41400_21305
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Entry
PC41400_21305 CDS
T06610
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pchi
Paenibacillus chitinolyticus
Pathway
pchi02020
Two-component system
pchi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PC41400_21305
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PC41400_21305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchi03021
]
PC41400_21305
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pchi02035
]
PC41400_21305
Transcription machinery [BR:
pchi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PC41400_21305
Bacterial motility proteins [BR:
pchi02035
]
Flagellar system
Flagellar assembly proteins
Stator
PC41400_21305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
PhyR_sigma-like
Sigma70_ECF
7TMR-HDED
DUF6522
MarR
HTH_5
CtpB_N-like
Motif
Other DBs
NCBI-ProteinID:
QAV20062
UniProt:
A0A410X0U1
LinkDB
All DBs
Position
complement(4722512..4723294)
Genome browser
AA seq
260 aa
AA seq
DB search
MIDKKPNLAHFDTWRQWKQGGSREAKQTLIETYLPLVEYVSGRLAIGLPKNVSKEDLGSF
GIMGLIDAVEKFDYERGLQFETYASWRIRGAIIDGLRQGDWVPRSVREKAKKIEEAYQKL
EQKYLRTVTDEEISDYLQVTEDEFQHMLQEIAVTSICSIDEPIREEESETRLSLLVDERA
KNPEFTVNEFYLKETLARAIEKLTEKERIVVSLFYFEELSLSEIAEVMSLSPSRISQLHS
KAMLRLRGVLSRYKVQLFEK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgattgataaaaaacctaatctggcgcatttcgatacgtggagacagtggaagcagggc
ggttccagagaagccaagcaaacgctgattgaaacgtacctgcctcttgtcgaatacgta
tcgggccgtttggcgattggtctccccaagaacgtttccaaggaagacctcggaagcttc
ggaatcatgggtctgatcgacgccgtcgagaagtttgattacgaacgcggtctgcagttc
gaaacttacgcgtcctggcgcatacgcggggctattatcgacggcctcagacaaggggac
tgggttccccgttccgtacgcgagaaggccaaaaaaatcgaggaagcgtatcagaagctg
gagcagaaatatcttcggaccgtgacggatgaagagatcagcgattatctccaggttacg
gaggatgagtttcagcacatgcttcaggaaatcgccgtaacctccatttgttccatagac
gaaccgattcgtgaagaggaatccgaaacccggctttcgcttctggtggacgagcgtgct
aaaaatccggaatttaccgttaacgaattttacctcaaagaaactcttgcgcgggcgata
gagaaattgacggagaaagaacggatcgtcgtttccctgttttatttcgaagaactttcc
ttgagcgagattgcggaagtgatgagtctgtcgccttcccgtatttctcagcttcactcc
aaagccatgctgcgattaagaggagttttgagtcgatataaagttcagttgtttgaaaaa
tag
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integrated database retrieval system
