Paenibacillus chitinolyticus: PC41400_24310
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Entry
PC41400_24310 CDS
T06610
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
pchi
Paenibacillus chitinolyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
LysM2_NFP
Phage_tail_X
Motif
Other DBs
NCBI-ProteinID:
QAV20635
UniProt:
A0A410X1Z6
LinkDB
All DBs
Position
complement(5344496..5347579)
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AA seq
1027 aa
AA seq
DB search
MKIHMVKKGDSLYKIAQKYNVDLDKVIEANPHIANPDQINVGEKVKIPGMPTKPHHHEGQ
HHDGQHHDGQYHEGHHHDGHHHEGQHHDGYHHGGQHHDGHHHEGQHHEPHHLVKHIVQQG
DTLWKLSKAWGIPLKEMIEVNTQLKNPSVLMTGETVYIPKKGHKEQEGVQGYQPHHGGTA
HGKKNTAPIQPVVPVPEVVEHKPEVVQPPPSPEINQITKITEINLNLAKVTDHKEEVKIE
LPAQPAPKVELPVIEQPPVQPVPQPPVPEYQLPQLVLPQIELPSYTPQPPPQHPCEPVVP
TPYPAYVKEAEAIPDCGGYPEILPMIQPCPPYAPFVSPYGHHHEMWKKEPCGCDGGLPVP
YGHHGAYEGGWGHPQTLPYPSVEIPQGIPSYQAMAAPEEEFIQPAGHIQAQPYPSQPWFP
SQPGLYGGMGVGPDLNTPYTDGAYCAEKPAFGQHPGYPEPYMPFGHEGFEHGGYGNVGGW
PQSHEQAGGWPQGLMPQQWAEQGQHAPGGYGNVGGWPQSHEQAGGWPQGSMPQQWAEQGQ
HAPGGYGDVGGWPQSHEQAGGWPQGLAPQQRSEQGQYARGGHEQEGVWTQGYASPQEAEQ
AAYALGSREQAGVWSQGYASPQEAEQAAYALGGQEQAGVWPQGYASPQEAEQAAYASGSR
EQGGVWPQGYASPQEVEQAAYAAGSREQADGVWPQGYASPQEAEQAAYASGIREQGGGWP
QGYASPQEAEQAAYASVSREQAGGWPQDFAPQQQPVQGQYAPGGYEQGGGWPQGFAPQQQ
PVQGQYAPGGYGEGGGWPQGFAPQQQPIQGQYAPGGYGEGGGWPQGFAPQPYGSQAFAAG
MASIPPSGGKKDCGCGCGGAKKGRGQTPETTNFPAFPSGFVPYAGGAQQSPYTPFTSYGQ
PDWERIYPPAFPVSYGYGPDQEGAVNPYAQIPQPAYAVSGPQFQGASNGIEGFQGSEQGY
GDSEARIHLADQEEESDSFLKTQTKAKKTSAPKKSKAPKSSVRTIIRKSGRSAPKQTVSA
NVPWMNV
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatccatatggttaaaaaaggggattcgctgtataaaatcgcccaaaaatacaac
gtcgatctcgataaagtgatcgaagcgaatcctcacatcgcgaacccggaccaaatcaac
gtcggcgaaaaggtgaaaattccgggaatgccgacgaaaccccatcaccatgaagggcag
catcacgatggacagcatcacgatgggcagtatcatgaaggacaccatcacgatggacac
catcacgaagggcagcatcacgatgggtaccatcacggtgggcagcatcacgatggacat
catcacgaaggtcagcatcatgagccccaccatctggtaaagcacattgtgcagcaggga
gatacgctgtggaaactctcgaaggcatggggaattccgctgaaagaaatgattgaggtc
aacacccaactgaaaaacccgagcgtactgatgaccggtgaaaccgtctatattccgaaa
aagggtcacaaagagcaagaaggcgttcaagggtatcagcctcatcacggcgggacagct
cacggcaagaagaatactgccccgatccagccggttgtccccgtgcccgaggtagtggag
cacaagccggaagtcgtccagccccctccatcaccggaaattaaccaaataacgaagata
acggaaattaacttaaacctggcaaaggtgacagaccataaagaggaagtaaagatcgaa
cttcccgcacagcctgcgcctaaggtagagctgccggttatcgagcagcctcccgtgcag
ccggttccgcagcctccggtgcctgaataccaactgcctcaactggtgctgccgcagatc
gagctgccgtcttatacaccgcagcctccgccccagcacccttgcgagcccgttgttccg
actccttatcccgcttatgtaaaagaggcggaggctattccggactgcggaggctatccg
gaaatccttccgatgattcagccctgccctccttatgcgcctttcgtgtctccatatggg
catcatcatgaaatgtggaaaaaagaaccgtgcggatgcgacggtggattgcccgtcccg
tatggacatcacggagcgtacgaaggcggttggggacatccgcagacgctgccgtatccg
agtgtggaaattcctcagggcattccgtcctatcaggctatggccgctcccgaggaagaa
ttcatccagccggccgggcatattcaggcacagccctatccgtcccagccttggtttccg
agccagcccggtttgtacggaggcatgggagtcggcccggatttgaataccccttacacg
gacggagcctattgtgcggaaaagcccgcattcggacagcatccgggttaccccgagcca
tacatgccatttggccatgagggctttgagcatggaggctacggtaacgtaggcggatgg
cctcagagccacgagcaggcaggcggatggccgcaaggcttaatgccgcagcaatgggcg
gagcaggggcagcatgcccccggaggctacggtaacgtaggcggatggcctcagagccac
gagcaggcaggcggatggccgcaaggctcaatgccgcagcaatgggcggagcaggggcag
catgcccccggaggctacggtgacgtaggcggatggcctcagagccacgagcaggcaggc
ggatggccgcaaggcttagcgccgcagcaacggtcggagcagggccaatacgcgcgcgga
ggccacgagcaggagggcgtctggacgcagggctacgcgtcgccgcaggaggcggagcag
gccgcatatgcgcttggaagccgcgagcaggcaggcgtctggtcgcagggctacgcatcg
ccgcaggaggcggagcaggccgcatatgcgcttggaggccaagagcaggcaggcgtctgg
ccgcagggctacgcgtcgccgcaggaggcggagcaggccgcatatgcgtccggaagccgc
gagcaggggggcgtctggccgcagggctacgcatcgccgcaggaggtggagcaggccgca
tatgcggccgggagccgcgagcaggcagacggcgtttggccgcagggctacgcatcgccg
caggaggcggagcaggccgcatatgcgtccggaatccgcgagcagggaggcggatggccg
cagggctacgcatcgccgcaggaggcggagcaggccgcatatgcgtccgtaagccgcgag
caggcaggcggatggccgcaagactttgcgccgcagcagcagccggtccagggccagtac
gcgcccggaggctacgagcagggaggcggatggccgcaaggcttcgcgccgcagcagcag
ccggttcagggccagtacgcacccggaggctacggtgaaggaggcggatggccgcaaggc
tttgctccgcagcagcagccgattcagggccagtacgcgcccggaggctacggtgaagga
ggcggatggccgcaaggctttgctccacagccttatggatcgcaggcttttgcggccggt
atggcgtctatcccgccatcggggggcaagaaagattgcggctgcggctgcgggggtgcc
aaaaagggccgcggtcagacgccggagacgactaacttcccggcattcccgtccgggttc
gtgccttacgcgggaggcgctcagcaatcgccgtacacgccgtttacaagttacggccag
ccggattgggaacggatttatccgcccgcgtttccggtctcgtacggttacggtccagat
caggaaggagcggtaaatccgtacgcccagattccccagcccgcctacgccgtttcgggt
ccgcagtttcagggggcctctaacgggatagagggcttccagggatccgaacagggatac
ggggacagtgaagcccggattcatctggccgatcaggaagaggaatcggattcttttttg
aagacgcaaaccaaagccaaaaaaacgtccgctcccaagaaatccaaagctcccaagagt
tccgtacgcacgatcatccgcaaatcgggccgcagcgcgccgaaacagacggttagtgca
aatgttccttggatgaacgtttaa
DBGET
integrated database retrieval system
