Paenibacillus chitinolyticus: PC41400_26430
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Entry
PC41400_26430 CDS
T06610
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pchi
Paenibacillus chitinolyticus
Pathway
pchi03420
Nucleotide excision repair
pchi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PC41400_26430
03430 Mismatch repair
PC41400_26430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchi03400
]
PC41400_26430
Enzymes [BR:
pchi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PC41400_26430
DNA repair and recombination proteins [BR:
pchi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PC41400_26430
MMR (mismatch excision repair)
Other MMR factors
PC41400_26430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
YdjO
AAA_30
AAA_12
Anti-RecBCD_p2
Motif
Other DBs
NCBI-ProteinID:
QAV21016
UniProt:
A0A410X329
LinkDB
All DBs
Position
complement(5770233..5772569)
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AA seq
778 aa
AA seq
DB search
MSQAPFYTVPPGTGHTNIPQAVMASAHTSRELVPDGERDAFYFRRLEAQGIALNEPQIRA
VRHFEGPLLTLAGAGSGKTSVLVCQTGYLLAVRGIRAASILLVTFSSKAAAEMRERIAAL
PGITAQEASRLQARTFHSFFLRVIRSQGVQEEIFNETRRQHILLKQIMRELGIPDTYQPE
TLLTLLSSYKMNRTELQGLPQQTKEEKEIRSILIRYEEWKRANAKIDFDDVLLRAYRMLK
ENESLLRSLQNRFQYVMVDEFQDTNGIQYELIRMIASPQNHLMVVGDDDQTIYSFNGARS
EFILHFEKEFPSAKVITLAINYRSGASIVGLGNEIIRHNKMRRVKTLKAANAGSARPQYI
RPLTTDEEAEIVLTRIRQDVERGKRSYGDYAVLYRSASNNRALLEQLVLREIPYIDYGDG
QLLYEHWLIKPVLDHMRLSLNRRDFEAMEGVLPSLYINREHGMAYIRQQEARQPKKGPLV
HLLSMPDKKDFQIEKIQTRLELIRELKKLKPIDAIRKMRVHFYDAYVETDGRKQPTQHKE
MLKEMLDELETSAERFRTTAEFVLFVDDVLSRSRQSGRHLSEEQGNRVALMTIHRSKGLE
FPVVVLIGACEGSLPHSSVLDPKAVDGAADLEEERRLAYVAVTRAREELIVSSPSLYRGR
KAGVSRFVLSAFTGRSGDTPASGRRAQPSSGKRTVTAVSRTAAASGRAPERSAPAAPVRT
ETVPAWLCTGPGCNAWVRIAAGEPAAGKASGAPVKACPLCGAPMTAGRRETAVRTAGR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcaggcccctttttacaccgtgcctccgggtacgggacacacgaacattccgcaa
gccgtcatggcttccgcacatacaagcagagaactggtcccggacggagaacgggacgct
ttttacttccgccgcctggaggcgcagggcatcgccctgaacgagcctcagatccgggcg
gtgagacacttcgaaggaccgctgctcacgctggcgggcgccggttcgggcaagacgtcc
gtgctcgtctgccagacgggttatctgctcgcggtgcgtgggatccgggcggcgagcatt
ttgcttgtcacgttttccagcaaagccgccgccgaaatgagagaacgcatcgccgcactg
ccgggaataacggcccaggaagcttcccggcttcaagcgcggacgtttcactcttttttt
ctgcgggtcataaggagccaaggcgtccaagaagagatttttaacgagacgcgcaggcag
cacatcctgctcaagcagattatgcgggagctgggcattcccgatacgtatcagcccgag
acgcttctgacgctgctttcctcttataaaatgaaccgtacggagctgcagggtctcccg
cagcagacgaaggaagagaaggaaatccgcagcatcctgatccgctatgaagagtggaag
cgggccaacgccaaaatcgacttcgacgacgtgcttctccgggcgtaccggatgctgaag
gagaacgagagcctgctgcgctcgctgcaaaaccgtttccagtatgtcatggtggacgag
ttccaggacacgaacggcatccagtacgagctgatccgcatgattgcgtcgccgcagaat
catttgatggtggtgggggatgacgatcagacgatttattcgtttaacggggcgcggagt
gaatttattcttcatttcgaaaaggagttcccgtccgccaaggtgatcacgctggcgatt
aattaccgctcgggggcatccatcgtcgggctcgggaacgaaatcatccggcacaacaag
atgcggcgggtgaagacgctgaaagccgcgaacgcaggcagtgcccggccccagtacatc
cgcccgctaacgactgacgaggaggcggaaatcgtcctcacccgtatccggcaggatgtg
gagcgggggaaacggagttacggggattacgccgtgctttatcgctccgcaagtaacaat
cgggctctgctggagcagctcgttctgcgcgaaatcccctatatcgattacggggacggg
cagctgctgtacgagcattggctgattaagcccgttctcgatcatatgcgtctgtctctg
aaccgccgcgacttcgaggcgatggagggagtactgccatccctgtacatcaaccgcgag
cacgggatggcgtatatccgccagcaggaggcgcggcagccgaagaaagggccgctggtt
catctgctgtccatgccggacaagaaggacttccagatagagaagatccagactaggctg
gaactgatccgggagctgaagaagctgaagcccatagacgcgatccgcaaaatgcgcgtg
catttctacgacgcctatgtcgagacggatgggcggaagcaaccgacccagcacaaggaa
atgctcaaggagatgctggacgaactggaaacgtcggcggaacggtttcgcaccacggcc
gagttcgtcttattcgtggacgatgtgctgtcccggagcaggcagagcggccgccatctc
tccgaggaacagggcaaccgggtcgcgttgatgaccattcaccgttccaaaggattggag
tttccggtggtcgtcctgatcggtgcctgcgagggcagcctgccccacagctccgtactt
gacccgaaagcggtggacggcgccgccgatctcgaagaggaacggcgcctcgcctacgtg
gccgtgacccgggcccgcgaggagctcatcgtaagctcgccttccctgtacaggggaaga
aaggcgggcgtctcgcggttcgtgttgtccgcttttacggggcggagcggcgatacgccg
gcttccggccggcgcgcgcagccgtcctccggcaagcggaccgtcacggcggtgagccgc
accgcggcggcgtccggccgggcaccggagcgaagcgcaccggccgcgccggtacgcacg
gagacggtgcccgcgtggctctgcaccgggccgggctgcaacgcctgggtgcggatcgcc
gccggcgaacccgcagcgggcaaggcctccggtgcgccggtcaaggcctgcccgctgtgc
ggggcgccgatgacggcgggccgccgggaaacggccgtgcgcacggccggccgttga
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