Paenibacillus chitinolyticus: PC41400_29010
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Entry
PC41400_29010 CDS
T06610
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pchi
Paenibacillus chitinolyticus
Pathway
pchi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PC41400_29010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchi03021
]
PC41400_29010
03400 DNA repair and recombination proteins [BR:
pchi03400
]
PC41400_29010
Enzymes [BR:
pchi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PC41400_29010
Transcription machinery [BR:
pchi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PC41400_29010
DNA repair and recombination proteins [BR:
pchi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PC41400_29010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PASTA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QAV21479
UniProt:
A0A410X4E4
LinkDB
All DBs
Position
complement(6379254..6380198)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVSLSEDGAYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVSSVQIDG
VLHEFSTIPGVMEDVTEIILNLKGLSLKIHSDEEKVLEIDAEGEGRITAADIRGDSDVEI
LNPDLHIATLSSDSRLHMRIHANRGRGYVPADKNKRDEQLIGVIPVDSIYTPITRVNYTV
ENTRVGQVTNYDKLTLEVWSDGSIRPEEAVSLGAKILTEHLMLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELITKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatcgaaaagccaaaaatagagaccgtatctttaagcgaagacggagcttac
ggcaaattcgtcgtagaaccgctggaacgcggatacgggaccacattaggtaactcacta
cgtcgtatcttactgtcttcactaccgggtgctgcggttagctccgtacaaatcgacgga
gttctccatgaattctcgactattccgggagttatggaggacgtaacggagattattctg
aatctgaaaggtctttctttgaaaatccattcagacgaagaaaaagtactggagatcgat
gccgaaggagaaggtagaatcacagctgctgatattcgcggagatagtgatgtggagatc
ttgaacccggatcttcatatcgcgactctatcgtctgattctcgtcttcatatgagaatt
catgcgaacagaggccgcggttatgtgccggctgataagaacaaacgggatgagcagctt
attggcgtcattccggttgactcgatctacactccgatcacgcgtgtgaactacacggta
gagaacactcgtgtcggccaagtgacgaactacgacaaactaaccctcgaagtgtggtcg
gacggaagtattcgccctgaggaagcagtaagtcttggtgcgaagattctgacggaacac
ctaatgctctttgttggattaaccgatgaagctaaagatgcggagatcatggtagagaaa
gaagaagataagaaagagaaagttctcgagatgacgatcgaggaactggatctttccgtt
cgttcttacaactgcctgaagcgtgccggtatcaataccgtgcaagagctgatcaccaaa
accgaagaagatatgatgaaagtgcgtaaccttggccgtaaatctcttgaagaagttcaa
gagaagctcgaagagctgggtcttggcctgcgtacggaagaataa
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