Paenibacillus chitinolyticus: PC41400_29485
Help
Entry
PC41400_29485 CDS
T06610
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pchi
Paenibacillus chitinolyticus
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchi03400
]
PC41400_29485
Enzymes [BR:
pchi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PC41400_29485
DNA repair and recombination proteins [BR:
pchi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PC41400_29485
Prokaryotic type
PC41400_29485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QAV21832
UniProt:
A0A410X5C8
LinkDB
All DBs
Position
6463725..6465116
Genome browser
AA seq
463 aa
AA seq
DB search
MILFIHRKDLRIDDLTAFDYIHSLGRPSLHVLILDPFLLRDGRDREHSGINFLRHVSRLI
REYRKAGAHLEVLAGEPHVVVDQLLDALPIEEIVLNGDITPYALVRDRKLKVSASARGVP
VTTLIDHTLADFGDFQHFAERRTPYQVFTPFYKKWNAYMHLFFRPSSAVTVRDLQTRPLP
DREAWSARFPLPLDPEAAGTAPDPAQTLSDFLEGGLRAYEAQRDRYAFETTSGISRHLNT
GALSVRRAYEAALGSERHEAWTRQLAWRDFYLYQAVYNPDFFVYEKKFDFSGLEDTLFER
WCRGQTGIPVVDAAMAELNATGHMPNRLRMVTAMFLTKNLRCPFTLGERYFRRKLADYDN
VLNRGGWLWSASLGFDASPYFRVMNPVTQSETHDPTGMYIRRWLPHLAHLGDKEIHKPQA
DAIVDLKSSRAAAIEIYKHMLAEAKPDAGAGPAGFSPDGFPPV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatcctttttatccatcgcaaagatctgcggattgacgacctgactgcgtttgattac
attcacagcttggggcgtccaagcctgcatgtcctgatactggaccctttcctgctgcgc
gacggccgggaccgggaacacagcggaatcaacttcctccgtcacgtttccaggcttatc
cgcgaataccggaaagcgggcgctcatctggaagtgcttgccggtgagcctcatgtcgtg
gtcgatcaactgctggacgcgcttccgattgaagaaatcgtcctgaacggcgacattacg
ccctacgcattagtacgcgaccgcaaactgaaggtttcagcttctgcgcgaggcgttccg
gttactacgctgatcgaccacactctcgccgatttcggggatttccagcatttcgcggag
cgccgcaccccttaccaggtatttacccctttttataaaaaatggaacgcttacatgcac
ctttttttccggccgtcgtcggccgtcaccgtgcgcgatttgcagacacggccgctgccg
gaccgcgaagcctggtccgcccggttcccgcttccgctggacccggaagcggcgggcacg
gcgcctgatcccgctcagactctgagcgactttctcgaaggaggcctccgcgcttatgaa
gcgcaaagggaccggtacgccttcgagacgaccagcgggatcagccgccacctgaacacc
ggcgcgctctccgtgcgccgggcgtatgaagccgctctcggcagcgagcggcacgaagcc
tggacgcgccagctggcgtggcgcgacttctacctgtaccaggccgtctataacccggat
ttcttcgtctacgagaagaaattcgatttctccggcctggaggacacgctcttcgagcgg
tggtgccgggggcagaccggcattccggtcgtggatgcggccatggcggagctgaacgcc
acggggcacatgccgaaccggctgcggatggtgacggccatgttcttgaccaagaacctg
cggtgtcccttcacgctgggtgaacggtatttccggcgcaagctcgccgattacgacaac
gtgctcaaccggggcggctggctgtggagcgcttcgctcggcttcgacgcgtctccgtac
ttccgcgtcatgaaccccgtcacccagtcggagacgcatgatccgacgggtatgtatatc
cggcggtggcttccccatctcgctcatctgggcgataaggagattcacaaaccgcaggct
gacgcgattgtcgatctgaagagctcacgcgccgcagcgatcgagatttacaagcacatg
ctggcggaggctaaacctgacgccggtgcgggccccgccggattttcacccgacggcttt
ccccctgtttaa
DBGET
integrated database retrieval system
